RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 DISP2A7MBM2 1401 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 STRCP1A6NGW2 1772 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 A0A1B0GTW7 788 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 LGALS16A8MUM7 142 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 GNAT1P11488 350 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 CD1EP15812 388 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 GRIA2P42262 883 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 GALNTL6Q49A17 601 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 RRP12Q5JTH9 1297 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 CAPRIN2Q6IMN6 1127 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ALG3Q92685 438 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 GJA10Q969M2 543 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 HVCN1Q96D96 273 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 STRBPQ96SI9 672 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 METTL22Q9BUU2 404 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ADAM33Q9BZ11 813 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 PCDHA3Q9Y5H8 950 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ITIH6Q6UXX5 1313 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 MYH9P35579 1960 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 MYH14Q7Z406 1995 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TCRBV5S4A2TA0A5A2 114 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 GSG1L2A8MUP6 293 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ANKRD63C9JTQ0 380 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ETS2P15036 469 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PECAM1P16284 738 aaPredicted RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PHKA1P46020 1223 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 UBXN1Q04323 297 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 EHHADHQ08426 723 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF790Q6PG37 636 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ADAT2Q7Z6V5 191 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PRUNE1Q86TP1 453 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 CNGA4Q8IV77 575 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 CRACR2BQ8N4Y2 399 aaPredicted RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 FAM89AQ96GI7 184 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 MIPEPQ99797 713 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TXLNGYQ9BZA5 131 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TMBIM4Q9HC24 238 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 FBXL5Q9UKA1 691 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PKD1L3Q7Z443 1732 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TMEM94Q12767 1356 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 GPR75-ASB3A0A0A6YYF3 556 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 MPHOSPH10O00566 681 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 CPLX1O14810 134 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 RNMTO43148 476 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 SRGNP10124 158 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 RASA1P20936 1047 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 HNRNPH3P31942 346 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 METAP2P50579 478 aaKnown RBP eCLIP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 RASSF7Q02833 373 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 SEC23AQ15436 765 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ZRSR1Q15695 479 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 CCDC96Q2M329 555 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TOM1L2Q6ZVM7 507 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 C2CD5Q86YS7 1000 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 SCFD2Q8WU76 684 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TMEM237Q96Q45 408 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 UIMC1Q96RL1 719 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 RPS6KC1Q96S38 1066 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 AAASQ9NRG9 546 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PAPOLBQ9NRJ5 636 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 LUC7L2Q9Y383 392 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ASB3Q9Y575 518 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TAF1P21675 1872 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ALPK2Q86TB3 2170 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ANKRD18BA2A2Z9 1011 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PEX11AO75192 247 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 CAPN15O75808 1086 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 KIF4AO95239 1232 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 CETPP11597 493 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 IARSP41252 1262 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 DCAF12L1Q5VU92 463 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 RIC3Q7Z5B4 369 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 KLHL7Q8IXQ5 586 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TTLL11Q8NHH1 800 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ANKRD24Q8TF21 1146 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ITFG2Q969R8 447 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TUBGCP2Q9BSJ2 902 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ETAA1Q9NY74 926 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TECPR2O15040 1411 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 KDM3BQ7LBC6 1761 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 SOCS7O14512 581 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 FESP07332 822 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PAEPP09466 180 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 SLURP2P0DP57 97 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 MTMR2Q13614 643 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 EMBQ6PCB8 327 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ZDHHC24Q6UX98 284 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 PPFIBP1Q86W92 1011 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 MREGQ8N565 214 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 FBXO27Q8NI29 283 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 TLCD1Q96CP7 247 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 GSDMAQ96QA5 445 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 ELAC2Q9BQ52 826 aaKnown RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 CTNNAL1Q9UBT7 734 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 IGSF9BQ9UPX0 1349 aa5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 HEMK1Q9Y5R4 338 aaPredicted RBP5.01□□□□□ -1.61
DEPDC1-202ENST00000456315 GRID2IPA4D2P6 1211 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 IRS4O14654 1257 aaPredicted RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 CYTH3O43739 400 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms