RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 DGKDQ16760 1214 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 TCTN1Q2MV58 587 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 DHX37Q8IY37 1157 aaKnown RBP14.96□□□□□ -0.01
TREX1-203ENST00000456089 TMTC2Q8N394 836 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 MICALL1Q8N3F8 863 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 MAF1Q9H063 256 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 PCDHA11Q9Y5I1 949 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 CCDC69A6NI79 296 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 GCOM1H8Y6P7 765 aaPredicted RBP14.95□□□□□ -0.02
TREX1-203ENST00000456089 PRC1O43663 620 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 GGPS1O95749 300 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 CA3P07451 260 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 PFKMP08237 780 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 POLR2MP0CAP2 368 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 ACTN1P12814 892 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 GHRHRQ02643 423 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 GPNMBQ14956 572 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 KIAA0753Q2KHM9 967 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 HSDL1Q3SXM5 330 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 SPRED2Q7Z698 418 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 RAB11FIP4Q86YS3 637 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 MB21D2Q8IYB1 491 aaPredicted RBP14.95□□□□□ -0.02
TREX1-203ENST00000456089 C7orf31Q8N865 590 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 IGDCC4Q8TDY8 1250 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 WNT8BQ93098 351 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 TMEM87BQ96K49 555 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 GTF2IRD1Q9UHL9 959 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 MICAL3Q7RTP6 2002 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 KAT6AQ92794 2004 aa14.95□□□□□ -0.02
TREX1-203ENST00000456089 PRRC2BQ5JSZ5 2229 aaKnown RBP14.94□□□□□ -0.02
TREX1-203ENST00000456089 PNMA6FA0A0J9YX94 578 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 EPOPA6NHQ4 379 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 RXRAP19793 462 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 UBA1P22314 1058 aaKnown RBP14.94□□□□□ -0.02
TREX1-203ENST00000456089 CCND2P30279 289 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 RFC2P35250 354 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 LAMC2Q13753 1193 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 CELF3Q5SZQ8 465 aaKnown RBP14.94□□□□□ -0.02
TREX1-203ENST00000456089 MYSM1Q5VVJ2 828 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 VSIG10LQ86VR7 867 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 SESTD1Q86VW0 696 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 CMTR1Q8N1G2 835 aaKnown RBP14.94□□□□□ -0.02
TREX1-203ENST00000456089 PPTC7Q8NI37 304 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
TREX1-203ENST00000456089 EMID1Q96A84 441 aaPredicted RBP14.94□□□□□ -0.02
TREX1-203ENST00000456089 SPATA33Q96N06 139 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 MTA3Q9BTC8 594 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 LY9Q9HBG7 655 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 TELO2Q9Y4R8 837 aa14.94□□□□□ -0.02
TREX1-203ENST00000456089 HAS3O00219 553 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 REC8O95072 547 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 F2P00734 622 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 CKBP12277 381 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 KIF5BP33176 963 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 TRAF1Q13077 416 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 KRT32Q14532 448 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 KRT40Q6A162 431 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 SYNE3Q6ZMZ3 975 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 LRRC8DQ7L1W4 858 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 ZNF654Q8IZM8 581 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 LRRC2Q9BYS8 371 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 RTEL1Q9NZ71 1219 aa14.93□□□□□ -0.02
TREX1-203ENST00000456089 hCG_1642624A0A1W2PR95 340 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 NBNO60934 754 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 PLEKHA8P1O95397 391 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 SELPP16109 830 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 DEFB103AP81534 67 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 MRPS9P82933 396 aaKnown RBP14.92□□□□□ -0.02
TREX1-203ENST00000456089 USP17L6PQ6QN14 398 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 HERC6Q8IVU3 1022 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 CCDC155Q8N6L0 562 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 CAGE1Q8TC20 777 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 AFAP1L1Q8TED9 768 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 NEK1Q96PY6 1258 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 SLC9A7Q96T83 725 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 SIP14410 1827 aa14.92□□□□□ -0.02
TREX1-203ENST00000456089 LCHNA4D1U4 455 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 DDAH1O94760 285 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 CALM1P0DP23 149 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 CALM2P0DP24 149 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 CALM3P0DP25 149 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 GNAQP50148 359 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 WDR5P61964 334 aaKnown RBP14.91□□□□□ -0.02
TREX1-203ENST00000456089 FGD1P98174 961 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 TAP1Q03518 808 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 SEMA3FQ13275 785 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 MBTPS1Q14703 1052 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 TRIM71Q2Q1W2 868 aaKnown RBP14.91□□□□□ -0.02
TREX1-203ENST00000456089 TJAP1Q5JTD0 557 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 ZNF618Q5T7W0 954 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 ARNTL2Q8WYA1 636 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 C16orf70Q9BSU1 422 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 KATNAL1Q9BW62 490 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 MLXIPQ9HAP2 919 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 MAP3K20Q9NYL2 800 aaKnown RBP14.91□□□□□ -0.02
TREX1-203ENST00000456089 SLC12A7Q9Y666 1083 aa14.91□□□□□ -0.02
TREX1-203ENST00000456089 SH2B2O14492 632 aaPredicted RBP14.9□□□□□ -0.02
TREX1-203ENST00000456089 HMGB1P09429 215 aaKnown RBP14.9□□□□□ -0.02
TREX1-203ENST00000456089 HOXD8P13378 290 aaPredicted RBP14.9□□□□□ -0.02
TREX1-203ENST00000456089 LIFRP42702 1097 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms