RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 ANKRD13CQ8N6S4 541 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 SNX29Q8TEQ0 813 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 SYN2Q92777 582 aaPredicted RBP19.56■□□□□ 0.72
PTPN6-204ENST00000456013 CAPS2Q9BXY5 557 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 UBA5Q9GZZ9 404 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 EFCC1Q9HA90 598 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 RBM12Q9NTZ6 932 aaKnown RBP19.56■□□□□ 0.72
PTPN6-204ENST00000456013 CEP72Q9P209 647 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 TDP2O95551 362 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 MRPS25P82663 173 aaKnown RBP19.56■□□□□ 0.72
PTPN6-204ENST00000456013 CFAP221Q4G0U5 840 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 ZNF804AQ7Z570 1209 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 TSEN2Q8NCE0 465 aaKnown RBP19.56■□□□□ 0.72
PTPN6-204ENST00000456013 PPM1EQ8WY54 764 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 NUDT12Q9BQG2 462 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 USP17L5A8MUK1 530 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 RPS6KA4O75676 772 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 ADCY7P51828 1080 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 SLC9C1Q4G0N8 1177 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 ZCWPW2Q504Y3 356 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 RC3H1Q5TC82 1133 aaKnown RBP19.55■□□□□ 0.72
PTPN6-204ENST00000456013 KCNK18Q7Z418 384 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 EFCAB13Q8IY85 973 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 MYOCDQ8IZQ8 938 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 TANGO6Q9C0B7 1094 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 COL4A3BPQ9Y5P4 624 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 NHSQ6T4R5 1651 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 GPR75-ASB3A0A0A6YYF3 556 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 BUB1O43683 1085 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 HSF2BPO75031 334 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 ZPR1O75312 459 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 FKBP3Q00688 224 aaKnown RBP19.55■□□□□ 0.72
PTPN6-204ENST00000456013 SEPT2Q15019 361 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 LRRC41Q15345 812 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 TDRD12Q587J7 1177 aaKnown RBP19.55■□□□□ 0.72
PTPN6-204ENST00000456013 GPIHBP1Q8IV16 184 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 TEX11Q8IYF3 940 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 GLIS3Q8NEA6 775 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 FAM107BQ9H098 131 aa19.55■□□□□ 0.72
PTPN6-204ENST00000456013 SERPING1P05155 500 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 SFMBT2Q5VUG0 894 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 C15orf52Q6ZUT6 534 aaKnown RBP19.54■□□□□ 0.72
PTPN6-204ENST00000456013 DNAJC19Q96DA6 116 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 GRIN2DO15399 1336 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 EIF3HO15372 352 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTPN6-204ENST00000456013 NOL4O94818 638 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 PDHBP11177 359 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 COASYQ13057 564 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 COA7Q96BR5 231 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 RUFY1Q96T51 708 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 LUC7LQ9NQ29 371 aaKnown RBP19.54■□□□□ 0.72
PTPN6-204ENST00000456013 GDF3Q9NR23 364 aa19.54■□□□□ 0.72
PTPN6-204ENST00000456013 TLR2O60603 784 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 CLSTN1O94985 981 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 PLCG2P16885 1265 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 ERCC3P19447 782 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 NOP2P46087 812 aaKnown RBP19.53■□□□□ 0.72
PTPN6-204ENST00000456013 NAP1L1P55209 391 aaKnown RBP19.53■□□□□ 0.72
PTPN6-204ENST00000456013 SKOR1P84550 965 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 GRAPQ13588 217 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 TTC31Q49AM3 519 aaPredicted RBP19.53■□□□□ 0.72
PTPN6-204ENST00000456013 FAM83BQ5T0W9 1011 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 IFT20Q8IY31 132 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 GRAPLQ8TC17 118 aaPredicted RBP19.53■□□□□ 0.72
PTPN6-204ENST00000456013 NLRC4Q9NPP4 1024 aa19.53■□□□□ 0.72
PTPN6-204ENST00000456013 A6NNZ2 444 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 ANKRD65E5RJM6 399 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 GNGT1P63211 74 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 TUBB8Q3ZCM7 444 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 CCDC40Q4G0X9 1142 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 TTMPQ5BVD1 217 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 PPP4R3AQ6IN85 833 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 SLC51AQ86UW1 340 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 MS4A14Q96JA4 679 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 CEP63Q96MT8 703 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 FOCADQ5VW36 1801 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 TRAF5O00463 557 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 CCT5P48643 541 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 NAB2Q15742 525 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 ECM1Q16610 540 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 PACS2Q86VP3 889 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 ARL8AQ96BM9 186 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.72
PTPN6-204ENST00000456013 MYH7BA7E2Y1 1941 aa19.52■□□□□ 0.71
PTPN6-204ENST00000456013 FRMPD2Q68DX3 1309 aaPredicted RBP19.52■□□□□ 0.71
PTPN6-204ENST00000456013 A0A087WUV0 522 aaPredicted RBP19.51■□□□□ 0.71
PTPN6-204ENST00000456013 CPP00450 1065 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 NFIXQ14938 502 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 ASPRV1Q53RT3 343 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 ZIM3Q96PE6 472 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 GRID2IPA4D2P6 1211 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 EBAG9O00559 213 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 PALMO75781 387 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 GLI1P08151 1106 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 MARSP56192 900 aaKnown RBP19.51■□□□□ 0.71
PTPN6-204ENST00000456013 FAM26FQ5R3K3 315 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 TMC4Q7Z404 712 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 BCAS4Q8TDM0 211 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 LSM14BQ9BX40 385 aaKnown RBP19.51■□□□□ 0.71
PTPN6-204ENST00000456013 PANK4Q9NVE7 773 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms