RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NLRX1Q86UT6 975 aa18.8■□□□□ 0.6
CCDC90B-202ENST00000455220 HAS1Q92839 578 aa18.8■□□□□ 0.6
CCDC90B-202ENST00000455220 WDR11Q9BZH6 1224 aa18.8■□□□□ 0.6
CCDC90B-202ENST00000455220 GDPD2Q9HCC8 539 aa18.8■□□□□ 0.6
CCDC90B-202ENST00000455220 FLRT1Q9NZU1 646 aa18.8■□□□□ 0.6
CCDC90B-202ENST00000455220 MSH4O15457 936 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 MAFGO15525 162 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 OR52Z1P0C646 297 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 ICAM3P32942 547 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 SEMA3FQ13275 785 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 IRF5Q13568 498 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 MTMR1Q13613 665 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 GNPTABQ3T906 1256 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 KATNBL1Q9H079 304 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 KCNH7Q9NS40 1196 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 MRVI1Q9Y6F6 885 aa18.79■□□□□ 0.6
CCDC90B-202ENST00000455220 SNAI1O95863 264 aaPredicted RBP18.78■□□□□ 0.6
CCDC90B-202ENST00000455220 ARP10275 920 aa18.78■□□□□ 0.6
CCDC90B-202ENST00000455220 CCL14Q16627 93 aa18.78■□□□□ 0.6
CCDC90B-202ENST00000455220 CDHR1Q96JP9 859 aa18.78■□□□□ 0.6
CCDC90B-202ENST00000455220 FAM20AQ96MK3 541 aa18.78■□□□□ 0.6
CCDC90B-202ENST00000455220 VTA1Q9NP79 307 aa18.78■□□□□ 0.6
CCDC90B-202ENST00000455220 SPATA31C2B4DYI2 1134 aa18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 MARCKSP29966 332 aaPredicted RBP18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 PRMT2P55345 433 aa18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 CSPP1Q1MSJ5 1256 aa18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 SLFN12Q8IYM2 578 aa18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 SLC5A5Q92911 643 aa18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 FERMT2Q96AC1 680 aa18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 AGO4Q9HCK5 861 aaKnown RBP18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 FBXO2Q9UK22 296 aaPredicted RBP18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 SRPRBQ9Y5M8 271 aaKnown RBP18.77■□□□□ 0.6
CCDC90B-202ENST00000455220 FBXO16Q8IX29 292 aaPredicted RBP18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 TRMT44Q8IYL2 757 aaKnown RBP18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 ABHD16BQ9H3Z7 469 aa18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 RBM47A0AV96 593 aaKnown RBP18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 IL17AQ16552 155 aa18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 AXDND1Q5T1B0 1012 aaPredicted RBP18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 EEPD1Q7L9B9 569 aa18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 KRI1Q8N9T8 703 aaKnown RBP18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 TRIB2Q92519 343 aa18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 ZNF577Q9BSK1 485 aa18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 PCDHA7Q9UN72 937 aa18.76■□□□□ 0.59
CCDC90B-202ENST00000455220 IPO5O00410 1097 aaKnown RBP18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 TGFB3P10600 412 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 HSPA8P11142 646 aaKnown RBP18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 KCNA2P16389 499 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 FXR2P51116 673 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 TAPT1Q6NXT6 567 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 DTHD1Q6ZMT9 781 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 SEPT14Q6ZU15 432 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 GJA10Q969M2 543 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 RIT2Q99578 217 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 SENP7Q9BQF6 1050 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 NRBP1Q9UHY1 535 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 HTTP42858 3142 aa18.75■□□□□ 0.59
CCDC90B-202ENST00000455220 FOXN1O15353 648 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 DHX15O43143 795 aaKnown RBP18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 CUTAO60888 179 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 ATP9AO75110 1047 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 PSMD10O75832 226 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 TXKP42681 527 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 ME1P48163 572 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 GRIN1Q05586 938 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 ITGB3BPQ13352 177 aaPredicted RBP18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 ACVR2BQ13705 512 aa18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 TTC12Q9H892 705 aaPredicted RBP18.74■□□□□ 0.59
CCDC90B-202ENST00000455220 NFASCO94856 1347 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 MARCH6O60337 910 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 CYP2C19P33261 490 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 MCM4P33991 863 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 SPIRE1Q08AE8 756 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 LRCH2Q5VUJ6 765 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 ADALQ6DHV7 355 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 CCDC62Q6P9F0 684 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 B3GNT9Q6UX72 402 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 IGSF22Q8N9C0 903 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 ZNF579Q8NAF0 562 aaKnown RBP18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 PXYLP1Q8TE99 480 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 SCFD2Q8WU76 684 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 TBC1D22BQ9NU19 505 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 VAV3Q9UKW4 847 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 PCDHA12Q9UN75 941 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 TRIM17Q9Y577 477 aa18.73■□□□□ 0.59
CCDC90B-202ENST00000455220 VWA3AA6NCI4 1184 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 GOLGA6L22H0YM25 854 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 ARIH2O95376 493 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 ZNF865P0CJ78 1059 aaPredicted RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 HSPA1AP0DMV8 641 aaKnown RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 HSPA1BP0DMV9 641 aaKnown RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 LONP1P36776 959 aaKnown RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 SP2Q02086 613 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 PDIA5Q14554 519 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 TMEM266Q2M3C6 531 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 MFSD14CQ5VZR4 134 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 RAET1EQ8TD07 263 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 CLIC6Q96NY7 704 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms