RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 SPATA33Q96N06 139 aa28.53■■■□□ 2.16
MSH2-203ENST00000454849 INPP4AQ96PE3 977 aaPredicted RBP28.53■■■□□ 2.16
MSH2-203ENST00000454849 NID2Q14112 1375 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 SOX1O00570 391 aaPredicted RBP28.52■■■□□ 2.16
MSH2-203ENST00000454849 PRPF3O43395 683 aaKnown RBP28.52■■■□□ 2.16
MSH2-203ENST00000454849 KPNA6O60684 536 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 ZNF286BP0CG31 522 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 EPHB4P54760 987 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 AKAP17AQ02040 695 aaKnown RBP28.52■■■□□ 2.16
MSH2-203ENST00000454849 HSDL1Q3SXM5 330 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 KCNV1Q6PIU1 500 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 ALDH8A1Q9H2A2 487 aaPredicted RBP28.52■■■□□ 2.16
MSH2-203ENST00000454849 MLXIPQ9HAP2 919 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 PKD2L1Q9P0L9 805 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 TELO2Q9Y4R8 837 aa28.52■■■□□ 2.16
MSH2-203ENST00000454849 LTBP2Q14767 1821 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 SPATA31C2B4DYI2 1134 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 CYP2C18P33260 490 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 DGKDQ16760 1214 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 GNPTABQ3T906 1256 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 PPP1R18Q6NYC8 613 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 TDHQ8IZJ6 230 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 KAT2BQ92831 832 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 MYH7BA7E2Y1 1941 aa28.51■■■□□ 2.15
MSH2-203ENST00000454849 UMODL1Q5DID0 1318 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 TIMP1P01033 207 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 TGFB3P10600 412 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 CYP2C9P11712 490 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 SP4Q02446 784 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 C9orf50Q5SZB4 431 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 JAKMIP3Q5VZ66 844 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 CYFIP1Q7L576 1253 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 PPTC7Q8NI37 304 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 EMID1Q96A84 441 aaPredicted RBP28.5■■■□□ 2.15
MSH2-203ENST00000454849 ZNF274Q96GC6 653 aaPredicted RBP28.5■■■□□ 2.15
MSH2-203ENST00000454849 ALG1Q9BT22 464 aa28.5■■■□□ 2.15
MSH2-203ENST00000454849 IFNAR1P17181 557 aa28.49■■■□□ 2.15
MSH2-203ENST00000454849 ITGB5P18084 799 aa28.49■■■□□ 2.15
MSH2-203ENST00000454849 SHHQ15465 462 aa28.49■■■□□ 2.15
MSH2-203ENST00000454849 LRCH3Q96II8 777 aa28.49■■■□□ 2.15
MSH2-203ENST00000454849 TPCN1Q9ULQ1 816 aa28.49■■■□□ 2.15
MSH2-203ENST00000454849 A0A1W2PPC1 479 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 hCG_1984214I3L0E3 225 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 FIBPO43427 364 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 STAM2O75886 525 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 ICAM3P32942 547 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 ANAPC15P60006 121 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 XRRA1Q6P2D8 792 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 NLRX1Q86UT6 975 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 ZNF713Q8N859 430 aaPredicted RBP28.48■■■□□ 2.15
MSH2-203ENST00000454849 ANO3Q9BYT9 981 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 VPS54Q9P1Q0 977 aa28.48■■■□□ 2.15
MSH2-203ENST00000454849 CPLX1O14810 134 aa28.47■■■□□ 2.15
MSH2-203ENST00000454849 ATP9AO75110 1047 aa28.47■■■□□ 2.15
MSH2-203ENST00000454849 AK2P54819 239 aa28.47■■■□□ 2.15
MSH2-203ENST00000454849 FPGSQ05932 587 aa28.47■■■□□ 2.15
MSH2-203ENST00000454849 CYP2W1Q8TAV3 490 aa28.47■■■□□ 2.15
MSH2-203ENST00000454849 HIPK3Q9H422 1215 aa28.47■■■□□ 2.15
MSH2-203ENST00000454849 PSEN2P49810 448 aa28.46■■■□□ 2.15
MSH2-203ENST00000454849 CCL23P55773 120 aa28.46■■■□□ 2.15
MSH2-203ENST00000454849 SSRP1Q08945 709 aaKnown RBP28.46■■■□□ 2.15
MSH2-203ENST00000454849 C8orf34Q49A92 452 aa28.46■■■□□ 2.15
MSH2-203ENST00000454849 RASGRP4Q8TDF6 673 aa28.46■■■□□ 2.15
MSH2-203ENST00000454849 RNF26Q9BY78 433 aaPredicted RBP28.46■■■□□ 2.15
MSH2-203ENST00000454849 EHMT1Q9H9B1 1298 aa28.46■■■□□ 2.15
MSH2-203ENST00000454849 UBIAD1Q9Y5Z9 338 aa28.46■■■□□ 2.15
MSH2-203ENST00000454849 SCN10AQ9Y5Y9 1956 aa28.45■■■□□ 2.14
MSH2-203ENST00000454849 RBAK-RBAKDNI3L0D1 243 aa28.45■■■□□ 2.14
MSH2-203ENST00000454849 CSF2RAP15509 400 aa28.45■■■□□ 2.14
MSH2-203ENST00000454849 NFRKBQ6P4R8 1299 aa28.45■■■□□ 2.14
MSH2-203ENST00000454849 AIFM3Q96NN9 605 aa28.45■■■□□ 2.14
MSH2-203ENST00000454849 UIMC1Q96RL1 719 aa28.45■■■□□ 2.14
MSH2-203ENST00000454849 NOC4LQ9BVI4 516 aaKnown RBP28.45■■■□□ 2.14
MSH2-203ENST00000454849 NOP56O00567 594 aaKnown RBP28.44■■■□□ 2.14
MSH2-203ENST00000454849 ACRP10323 421 aa28.44■■■□□ 2.14
MSH2-203ENST00000454849 CLK2P49760 499 aaKnown RBP28.44■■■□□ 2.14
MSH2-203ENST00000454849 SCRN1Q12765 414 aa28.44■■■□□ 2.14
MSH2-203ENST00000454849 NEDD9Q14511 834 aa28.44■■■□□ 2.14
MSH2-203ENST00000454849 MFSD10Q14728 455 aa28.44■■■□□ 2.14
MSH2-203ENST00000454849 MFSD5Q6N075 450 aa28.44■■■□□ 2.14
MSH2-203ENST00000454849 SLKQ9H2G2 1235 aaPredicted RBP28.44■■■□□ 2.14
MSH2-203ENST00000454849 C6orf50Q9HD87 102 aa28.44■■■□□ 2.14
MSH2-203ENST00000454849 DOCK5Q9H7D0 1870 aa28.44■■■□□ 2.14
MSH2-203ENST00000454849 PPFIA4O75335 1185 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 FOSP01100 380 aaPredicted RBP28.43■■■□□ 2.14
MSH2-203ENST00000454849 NEK4P51957 841 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 MTMR1Q13613 665 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 KIAA0753Q2KHM9 967 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 GDF6Q6KF10 455 aaPredicted RBP28.43■■■□□ 2.14
MSH2-203ENST00000454849 METTL7BQ6UX53 244 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 TRIM22Q8IYM9 498 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 NECAB1Q8N987 351 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 GPRASP2Q96D09 838 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 SEZ6LQ9BYH1 1024 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 ZMYND12Q9H0C1 365 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 JADE2Q9NQC1 790 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 HDAC6Q9UBN7 1215 aa28.43■■■□□ 2.14
MSH2-203ENST00000454849 UTP14CQ5TAP6 766 aaKnown RBP28.42■■■□□ 2.14
MSH2-203ENST00000454849 GPR20Q99678 358 aa28.42■■■□□ 2.14
MSH2-203ENST00000454849 MXRA8Q9BRK3 442 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms