RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PFASO15067 1338 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 PP2D1A8MPX8 630 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 MEIS1O00470 390 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 MSH4O15457 936 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 LIG1P18858 919 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 CDC25AP30304 524 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 Q4G0T1 1027 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 PCNX4Q63HM2 1172 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 PLEKHH3Q7Z736 793 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 NPLOC4Q8TAT6 608 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 ETNPPLQ8TBG4 499 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 NSUN6Q8TEA1 469 aaKnown RBP12.45□□□□□ -0.42
SCN9A-205ENST00000454569 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 CSRNP2Q9H175 543 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 TELO2Q9Y4R8 837 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 SRPRBQ9Y5M8 271 aaKnown RBP12.45□□□□□ -0.42
SCN9A-205ENST00000454569 HTTP42858 3142 aa12.45□□□□□ -0.42
SCN9A-205ENST00000454569 VWA3AA6NCI4 1184 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 ATP9AO75110 1047 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 OR52Z1P0C646 297 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 COPB2P35606 906 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 ZNF76P36508 570 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 TXKP42681 527 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 GRB14Q14449 540 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 CEP55Q53EZ4 464 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 MORN1Q5T089 497 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 TMEM63BQ5T3F8 832 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 MOXD1Q6UVY6 613 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 PLA2G4DQ86XP0 818 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 KCNG4Q8TDN1 519 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 TSKSQ9UJT2 592 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 GJD2Q9UKL4 321 aa12.44□□□□□ -0.42
SCN9A-205ENST00000454569 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 PTGS1P23219 599 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 EDNRBP24530 442 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 MAPK4P31152 587 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 TECP42680 631 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 CALCRLQ16602 461 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 ADALQ6DHV7 355 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
SCN9A-205ENST00000454569 DNERQ8NFT8 737 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 USP6NLQ92738 828 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 EPSTI1Q96J88 318 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 TRIM47Q96LD4 638 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 FLRT1Q9NZU1 646 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 PKD2L1Q9P0L9 805 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 CEP131Q9UPN4 1083 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 MORC2Q9Y6X9 1032 aaPredicted RBP12.43□□□□□ -0.42
SCN9A-205ENST00000454569 CASP8AP2Q9UKL3 1982 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 A0A087X0B3 334 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 GOLGA6L22H0YM25 854 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 STRNO43815 780 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 CUTAO60888 179 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 GCFC2P16383 781 aaKnown RBP12.43□□□□□ -0.42
SCN9A-205ENST00000454569 UBE2HP62256 183 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 SP2Q02086 613 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 CCL14Q16627 93 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
SCN9A-205ENST00000454569 DNAJC5GQ8N7S2 189 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 MAF1Q9H063 256 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 EHMT1Q9H9B1 1298 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 JADE2Q9NQC1 790 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 KCNH7Q9NS40 1196 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 GABRQQ9UN88 632 aa12.43□□□□□ -0.42
SCN9A-205ENST00000454569 POTEMA6NI47 508 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 SLC15A5A6NIM6 579 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 DHX15O43143 795 aaKnown RBP12.42□□□□□ -0.42
SCN9A-205ENST00000454569 CCND2P30279 289 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 PSMC4P43686 418 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 NDUFA8P51970 172 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 LACTBP83111 547 aaPredicted RBP12.42□□□□□ -0.42
SCN9A-205ENST00000454569 SPIRE1Q08AE8 756 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 ITGB3BPQ13352 177 aaPredicted RBP12.42□□□□□ -0.42
SCN9A-205ENST00000454569 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 RESP18Q5W5W9 173 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 ARL6IP4Q66PJ3 421 aaKnown RBP12.42□□□□□ -0.42
SCN9A-205ENST00000454569 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 LRRC15Q8TF66 581 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 INPP4AQ96PE3 977 aaPredicted RBP12.42□□□□□ -0.42
SCN9A-205ENST00000454569 IWS1Q96ST2 819 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 CFHR5Q9BXR6 569 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 PANK2Q9BZ23 570 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
SCN9A-205ENST00000454569 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 IVNS1ABPQ9Y6Y0 642 aa12.42□□□□□ -0.42
SCN9A-205ENST00000454569 MYH9P35579 1960 aaKnown RBP12.42□□□□□ -0.42
SCN9A-205ENST00000454569 EML1O00423 815 aa12.41□□□□□ -0.42
SCN9A-205ENST00000454569 SORBS3O60504 671 aa12.41□□□□□ -0.42
SCN9A-205ENST00000454569 NR1I2O75469 434 aa12.41□□□□□ -0.42
SCN9A-205ENST00000454569 ARIH2O95376 493 aa12.41□□□□□ -0.42
SCN9A-205ENST00000454569 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
SCN9A-205ENST00000454569 BMP15O95972 392 aa12.41□□□□□ -0.42
SCN9A-205ENST00000454569 PTMSP20962 102 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms