RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SENP2Q9HC62 589 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PXMP2Q9NR77 195 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZBTB47Q9UFB7 747 aaPredicted RBP7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HCN4Q9Y3Q4 1203 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TAF6LQ9Y6J9 622 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ABCB11O95342 1321 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 UPP2O95045 317 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GGPS1O95749 300 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CXCL10P02778 98 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PARP1P09874 1014 aaKnown RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 LINC00271P0C7V0 271 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HOXD11P31277 338 aaPredicted RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SP2Q02086 613 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 DGKDQ16760 1214 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GPATCH4Q5T3I0 446 aaKnown RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SESTD1Q86VW0 696 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 FCHSD1Q86WN1 690 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 FBXO11Q86XK2 927 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 FBXO22Q8NEZ5 403 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PPTC7Q8NI37 304 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PHOSPHO2Q8TCD6 241 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 NSUN6Q8TEA1 469 aaKnown RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZBTB10Q96DT7 871 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SPATA33Q96N06 139 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 UIMC1Q96RL1 719 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TGS1Q96RS0 853 aaKnown RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZSCAN10Q96SZ4 725 aaPredicted RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MPHOSPH6Q99547 160 aaKnown RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 DIAPH3Q9NSV4 1193 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TCP11L1Q9NUJ3 509 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 DDX41Q9UJV9 622 aaKnown RBP6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 COG5Q9UP83 839 aa6.99□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CACNA1HO95180 2353 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TECTAO75443 2155 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 LOC102724159A0A0B4J2E5 919 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HAS3O00219 553 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TREHO43280 583 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 KPNA6O60684 536 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 LGALS2P05162 132 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 NR3C2P08235 984 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SMIM10L2AP0DMW4 78 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SMIM10L2BP0DMW5 78 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SDSP20132 328 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CASTP20810 708 aaKnown RBP6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 IBSPP21815 317 aaPredicted RBP6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ERVK-21P61565 698 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PTPN11Q06124 597 aaPredicted RBP6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RBL2Q08999 1139 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PWP2Q15269 919 aaKnown RBP6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 STXBP2Q15833 593 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ASPRV1Q53RT3 343 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PTCRAQ6ISU1 281 aaPredicted RBP6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CYB5R4Q7L1T6 521 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 DBF4BQ8NFT6 615 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 YME1L1Q96TA2 773 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PDCD2LQ9BRP1 358 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MYL10Q9BUA6 226 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SEZ6LQ9BYH1 1024 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RNF41Q9H4P4 317 aaPredicted RBP6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PKD2L1Q9P0L9 805 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RALGAPA2Q2PPJ7 1873 aa6.98□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZNF213O14771 459 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GHRP10912 638 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HOXD8P13378 290 aaPredicted RBP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MARK3P27448 753 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GTF2F1P35269 517 aaKnown RBP eCLIP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HSD17B4P51659 736 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SEMA3FQ13275 785 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PTK7Q13308 1070 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 IKBKEQ14164 716 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PGM5Q15124 567 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 EPC2Q52LR7 807 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TCEAL5Q5H9L2 206 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CELF3Q5SZQ8 465 aaKnown RBP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 IFIT1BQ5T764 474 aaKnown RBP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MYSM1Q5VVJ2 828 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RUFY4Q6ZNE9 571 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SERINC5Q86VE9 423 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 IQCA1Q86XH1 822 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RAB11FIP4Q86YS3 637 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PLEKHM2Q8IWE5 1019 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GJD3Q8N144 294 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 LMBR1Q8WVP7 490 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ATP6V0A1Q93050 837 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 EMID1Q96A84 441 aaPredicted RBP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 YTHDC1Q96MU7 727 aaKnown RBP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PIGSQ96S52 555 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RAD9AQ99638 391 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 UBAC1Q9BSL1 405 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 C16orf70Q9BSU1 422 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 KATNAL1Q9BW62 490 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 IFIH1Q9BYX4 1025 aaKnown RBP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SETD4Q9NVD3 440 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZSWIM5Q9P217 1185 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MAD2L2Q9UI95 211 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MRPL11Q9Y3B7 192 aaKnown RBP6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PCDHGC5Q9Y5F6 944 aa6.97□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CFAP54Q96N23 3096 aa6.96□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms