RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 F2P00734 622 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 HOXD8P13378 290 aaPredicted RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 ICAM3P32942 547 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 FGD1P98174 961 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 SEMA3FQ13275 785 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 MFSD10Q14728 455 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 PTGISQ16647 500 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 UBE2SQ16763 222 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 HSDL1Q3SXM5 330 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 GDF6Q6KF10 455 aaPredicted RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 HEATR3Q7Z4Q2 680 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 SESTD1Q86VW0 696 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 RPUSD2Q8IZ73 545 aaKnown RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 RETREG2Q8NC44 543 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 JAKMIP1Q96N16 626 aaKnown RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 TTYH1Q9H313 450 aaPredicted RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 BCAS3Q9H6U6 928 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 CXXC1Q9P0U4 656 aaPredicted RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 HDAC6Q9UBN7 1215 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 NAP1L2Q9ULW6 460 aaPredicted RBP12.39□□□□□ -0.43
LMCD1-205ENST00000454244 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 SCN10AQ9Y5Y9 1956 aa12.39□□□□□ -0.43
LMCD1-205ENST00000454244 SPATA31C2B4DYI2 1134 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 HAS3O00219 553 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 FIBPO43427 364 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 REC8O95072 547 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 DNAJB2P25686 324 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 FUT2Q10981 343 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 BFSP2Q13515 415 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 KIAA0753Q2KHM9 967 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 PCNX4Q63HM2 1172 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 WWC2Q6AWC2 1192 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 XRRA1Q6P2D8 792 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 BLOC1S2Q6QNY1 142 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 DEFB128Q7Z7B8 93 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 C7orf31Q8N865 590 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 VWCEQ96DN2 955 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
LMCD1-205ENST00000454244 GTF2IRD1Q9UHL9 959 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
LMCD1-205ENST00000454244 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 NOP56O00567 594 aaKnown RBP12.37□□□□□ -0.43
LMCD1-205ENST00000454244 IQCF3P0C7M6 154 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 CDC27P30260 824 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 PBX2P40425 430 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 NAPAP54920 295 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 APOBRQ0VD83 1088 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 NEDD9Q14511 834 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 Q6ZUG5 572 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 CYFIP1Q7L576 1253 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 DHX38Q92620 1227 aaKnown RBP12.37□□□□□ -0.43
LMCD1-205ENST00000454244 BRF1Q92994 677 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 TIFAQ96CG3 184 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 CDX2Q99626 313 aaPredicted RBP12.37□□□□□ -0.43
LMCD1-205ENST00000454244 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 PBX4Q9BYU1 374 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
LMCD1-205ENST00000454244 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
LMCD1-205ENST00000454244 SPDYE3A6NKU9 549 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 ZBBXA8MT70 800 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 LGALS2P05162 132 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 PFKMP08237 780 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 RFC2P35250 354 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 RCAN1P53805 252 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 ZNF200P98182 395 aaPredicted RBP12.36□□□□□ -0.43
LMCD1-205ENST00000454244 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 METTL7BQ6UX53 244 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 CCDC155Q8N6L0 562 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 SLC17A8Q8NDX2 589 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 CAGE1Q8TC20 777 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 MYLIPQ8WY64 445 aa12.36□□□□□ -0.43
LMCD1-205ENST00000454244 STXBP3O00186 592 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 ITGB5P18084 799 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 RPS6KB1P23443 525 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 PSMA5P28066 241 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
LMCD1-205ENST00000454244 METAP2P50579 478 aaKnown RBP eCLIP12.35□□□□□ -0.43
LMCD1-205ENST00000454244 SP4Q02446 784 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 HIC1Q14526 733 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 RAB30Q15771 203 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
LMCD1-205ENST00000454244 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 GPRASP2Q96D09 838 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 GPR20Q99678 358 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
LMCD1-205ENST00000454244 ZNF576Q9H609 170 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 EHMT1Q9H9B1 1298 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
LMCD1-205ENST00000454244 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms