RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 ABCB11O95342 1321 aa25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 EMSYQ7Z589 1322 aa25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 H3BNC9 293 aa25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 HOXD8P13378 290 aaPredicted RBP25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 EIF2AK2P19525 551 aaKnown RBP25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 HAND2P61296 217 aa25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 GPATCH4Q5T3I0 446 aaKnown RBP25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 MAF1Q9H063 256 aa25.45■■□□□ 1.66
TNFRSF25-208ENST00000453341 SALL3Q9BXA9 1300 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 C19orf67A6NJJ6 358 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 GPM6BQ13491 265 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 LAMC2Q13753 1193 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 PLEKHG4Q58EX7 1191 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 SERINC5Q86VE9 423 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 FAM227BQ96M60 508 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 SAMD11Q96NU1 681 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 OSBPL7Q9BZF2 842 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 HELLSQ9NRZ9 838 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 MRVI1Q9Y6F6 885 aa25.44■■□□□ 1.66
TNFRSF25-208ENST00000453341 USP34Q70CQ2 3546 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 MYH6P13533 1939 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 A0A0D9SFI3 127 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 RSPH10B2B2RC85 870 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 EIF3JO75822 258 aaKnown RBP25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 RSPH10BP0C881 870 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 THPOP40225 353 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 ARHGEF16Q5VV41 709 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 EP400NLQ6ZTU2 488 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 HFE2Q6ZVN8 426 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 DHX37Q8IY37 1157 aaKnown RBP25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 KCNH6Q9H252 994 aa25.43■■□□□ 1.66
TNFRSF25-208ENST00000453341 COL4A6Q14031 1691 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 TECTAO75443 2155 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 SORBS3O60504 671 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 RGS20O76081 388 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 NR3C2P08235 984 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 TBC1D10CQ8IV04 446 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 ADHFE1Q8IWW8 467 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 ADGRF4Q8IZF3 695 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 YME1L1Q96TA2 773 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 ZKSCAN3Q9BRR0 538 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 NSUN3Q9H649 340 aaKnown RBP25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 PXMP2Q9NR77 195 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 PRKAG3Q9UGI9 489 aa25.42■■□□□ 1.66
TNFRSF25-208ENST00000453341 ZMYM6O95789 1325 aa25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 HSPD1P10809 573 aaKnown RBP25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 QRICH1Q2TAL8 776 aa25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 HSDL1Q3SXM5 330 aa25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 ZNF589Q86UQ0 364 aaPredicted RBP25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 FBXO11Q86XK2 927 aa25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 MCF2L2Q86YR7 1114 aa25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 TMEM192Q8IY95 271 aa25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 TOP1MTQ969P6 601 aa25.41■■□□□ 1.66
TNFRSF25-208ENST00000453341 RALGAPA2Q2PPJ7 1873 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 IRS1P35568 1242 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 LTBRP36941 435 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 MYSM1Q5VVJ2 828 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 EVI5LQ96CN4 794 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 C16orf70Q9BSU1 422 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 CLDND1Q9NY35 253 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 PCDHB15Q9Y5E8 787 aa25.4■■□□□ 1.66
TNFRSF25-208ENST00000453341 NEDD4P46934 1319 aa25.39■■□□□ 1.66
TNFRSF25-208ENST00000453341 PPFIA4O75335 1185 aa25.39■■□□□ 1.66
TNFRSF25-208ENST00000453341 UPP2O95045 317 aa25.39■■□□□ 1.66
TNFRSF25-208ENST00000453341 MCMDC2Q4G0Z9 681 aa25.39■■□□□ 1.66
TNFRSF25-208ENST00000453341 MFSD6Q6ZSS7 791 aa25.39■■□□□ 1.66
TNFRSF25-208ENST00000453341 RPAINQ86UA6 219 aa25.39■■□□□ 1.66
TNFRSF25-208ENST00000453341 FAM50BQ9Y247 325 aa25.39■■□□□ 1.66
TNFRSF25-208ENST00000453341 OPLAHO14841 1288 aa25.38■■□□□ 1.65
TNFRSF25-208ENST00000453341 HOXC8P31273 242 aa25.38■■□□□ 1.65
TNFRSF25-208ENST00000453341 CELF3Q5SZQ8 465 aaKnown RBP25.38■■□□□ 1.65
TNFRSF25-208ENST00000453341 SPATA33Q96N06 139 aa25.38■■□□□ 1.65
TNFRSF25-208ENST00000453341 MRPL11Q9Y3B7 192 aaKnown RBP25.38■■□□□ 1.65
TNFRSF25-208ENST00000453341 GGPS1O95749 300 aa25.37■■□□□ 1.65
TNFRSF25-208ENST00000453341 CFBP00751 764 aa25.37■■□□□ 1.65
TNFRSF25-208ENST00000453341 SP2Q02086 613 aa25.37■■□□□ 1.65
TNFRSF25-208ENST00000453341 DGKHQ86XP1 1220 aa25.37■■□□□ 1.65
TNFRSF25-208ENST00000453341 PNMA1Q8ND90 353 aa25.37■■□□□ 1.65
TNFRSF25-208ENST00000453341 SEPT8Q92599 483 aa25.37■■□□□ 1.65
TNFRSF25-208ENST00000453341 ATP6V0A1Q93050 837 aa25.37■■□□□ 1.65
TNFRSF25-208ENST00000453341 ZDBF2Q9HCK1 2354 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 C17orf102A2RUQ5 167 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 TREHO43280 583 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 CTSHP09668 335 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 PCP11498 1178 aaKnown RBP25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 HSD17B4P51659 736 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 DLX2Q07687 328 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 CLUL1Q15846 466 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 CTC1Q2NKJ3 1217 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 PHOX2BQ99453 314 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 PDCD2LQ9BRP1 358 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 MUTYHQ9UIF7 546 aa25.36■■□□□ 1.65
TNFRSF25-208ENST00000453341 CFAP54Q96N23 3096 aa25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 LINC00271P0C7V0 271 aa25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 MYCLP12524 364 aaPredicted RBP25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 UBA1P22314 1058 aaKnown RBP25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 SMAD2Q15796 467 aaKnown RBP25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 ESR2Q92731 530 aa25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 GPKOWQ92917 476 aaPredicted RBP eCLIP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms