RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 PDE4DQ08499 809 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MTMR1Q13613 665 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 GNPTABQ3T906 1256 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SPECC1Q5M775 1068 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SLC5A5Q92911 643 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 GPRASP2Q96D09 838 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 RIT2Q99578 217 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ZNF577Q9BSK1 485 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CCSER1Q9C0I3 900 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 DACT1Q9NYF0 836 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 HPSEQ9Y251 543 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MGAMO43451 1857 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 IPO5O00410 1097 aaKnown RBP14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SLC26A4O43511 780 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 KINO60870 393 aaKnown RBP14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 NR1I2O75469 434 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ZNF202O95125 648 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ARP10275 920 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 PFKFB1P16118 471 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 EDNRBP24530 442 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 NDUFA8P51970 172 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 GRB14Q14449 540 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ZNF792Q3KQV3 632 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ZNF467Q7Z7K2 595 aaPredicted RBP14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 FMR1NBQ8N0W7 255 aaPredicted RBP14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ENGASEQ8NFI3 743 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SYMPKQ92797 1274 aaKnown RBP14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CCDC34Q96HJ3 373 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 EPSTI1Q96J88 318 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ZFP91Q96JP5 570 aaPredicted RBP14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 INPP4AQ96PE3 977 aaPredicted RBP14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CFHR5Q9BXR6 569 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 WDR11Q9BZH6 1224 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 KCNH7Q9NS40 1196 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TBC1D22BQ9NU19 505 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 LRWD1Q9UFC0 647 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CCDC39Q9UFE4 941 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 USP25Q9UHP3 1055 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MCM3APO60318 1980 aa14.13□□□□□ -0.15
HLA-DPA1-244ENST00000453337 GAS7O60861 476 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 COBLO75128 1261 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 LETM1O95202 739 aaPredicted RBP14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SNW1Q13573 536 aaKnown RBP14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 LRCH2Q5VUJ6 765 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 KRT79Q5XKE5 535 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CAVIN1Q6NZI2 390 aaKnown RBP14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 KCNV1Q6PIU1 500 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ERMNQ8TAM6 284 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MORC4Q8TE76 937 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TIGD1Q96MW7 591 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 AGO4Q9HCK5 861 aaKnown RBP14.12□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SPATA31C2B4DYI2 1134 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CTAGE5O15320 804 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 POLR2DO15514 142 aaKnown RBP14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 PSMD10O75832 226 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TGFB3P10600 412 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ICAM3P32942 547 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MAP2K5Q13163 448 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 KIF22Q14807 665 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MORN1Q5T089 497 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CCDC183Q5T5S1 534 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 KANK3Q6NY19 840 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 USP49Q70CQ1 688 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 OTOP1Q7RTM1 612 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CABP7Q86V35 215 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 IQUBQ8NA54 791 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CALML4Q96GE6 196 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 NUDT12Q9BQG2 462 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TEKT3Q9BXF9 490 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TCEAL9Q9UHQ7 104 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 HOOK1Q9UJC3 728 aaKnown RBP14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ASTN1O14525 1302 aa14.11□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TRPA1O75762 1119 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TBC1D8O95759 1140 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 FCGRTP55899 365 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 PPP2R5CQ13362 524 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 RRAGBQ5VZM2 374 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 MAMDC4Q6UXC1 1216 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ELOA2Q8IYF1 753 aaPredicted RBP14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 GIMAP8Q8ND71 665 aaPredicted RBP14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 RASSF8Q8NHQ8 419 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SOCS4Q8WXH5 440 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 FGD4Q96M96 766 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 PANK2Q9BZ23 570 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 NUP62CLQ9H1M0 184 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 RNF186Q9NXI6 227 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ZNF236Q9UL36 1845 aa14.1□□□□□ -0.15
HLA-DPA1-244ENST00000453337 POTEMA6NI47 508 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TNPO2O14787 897 aaKnown RBP14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 RGS20O76081 388 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 HOXC6P09630 235 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CDC25AP30304 524 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 HTRA3P83110 453 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SP3Q02447 781 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SEPT14Q6ZU15 432 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms