RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 AAMPQ13685 434 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 MBTPS1Q14703 1052 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 ZNF618Q5T7W0 954 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 STOX1Q6ZVD7 989 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 DHX37Q8IY37 1157 aaKnown RBP13.6□□□□□ -0.23
HERC3-207ENST00000452979 SAMD3Q8N6K7 520 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 GDPD5Q8WTR4 605 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 WNT8BQ93098 351 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 RILPL2Q969X0 211 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 ALG1Q9BT22 464 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 OSBPL3Q9H4L5 887 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 MRVI1Q9Y6F6 885 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 B4E1Z4 1266 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 PI4K2BG5E9Z4 385 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 LGR5O75473 907 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 RGS20O76081 388 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 HTRA4P83105 476 aaPredicted RBP13.59□□□□□ -0.23
HERC3-207ENST00000452979 HIC1Q14526 733 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 TMEM31Q5JXX7 168 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 CELF3Q5SZQ8 465 aaKnown RBP13.59□□□□□ -0.23
HERC3-207ENST00000452979 VSIG10LQ86VR7 867 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.238e-11■■■■■ 33.2
HERC3-207ENST00000452979 MTMR8Q96EF0 704 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 PDCD2LQ9BRP1 358 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 AMNQ9BXJ7 453 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 VAT1LQ9HCJ6 419 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 CD320Q9NPF0 282 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 C11orf16Q9NQ32 467 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 EMSYQ7Z589 1322 aa13.59□□□□□ -0.23
HERC3-207ENST00000452979 MICAL3Q7RTP6 2002 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 CFBP00751 764 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 ZNF286BP0CG31 522 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 TGFB3P10600 412 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 ZNF200P98182 395 aaPredicted RBP13.58□□□□□ -0.24
HERC3-207ENST00000452979 HSDL1Q3SXM5 330 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 LEXMQ3ZCV2 418 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
HERC3-207ENST00000452979 SERINC5Q86VE9 423 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
HERC3-207ENST00000452979 C16orf70Q9BSU1 422 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 LNPKQ9C0E8 428 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 UBE2ZQ9H832 354 aaPredicted RBP13.58□□□□□ -0.24
HERC3-207ENST00000452979 MTUS1Q9ULD2 1270 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
HERC3-207ENST00000452979 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
HERC3-207ENST00000452979 HOXC8P31273 242 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 SP2Q02086 613 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 PLEKHG4Q58EX7 1191 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 STAG2Q8N3U4 1231 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 DBF4BQ8NFT6 615 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 KRT23Q9C075 422 aa13.57□□□□□ -0.24
HERC3-207ENST00000452979 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
HERC3-207ENST00000452979 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 KLRF2D3W0D1 207 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 PPP1R11O60927 126 aaPredicted RBP13.56□□□□□ -0.24
HERC3-207ENST00000452979 AMHP03971 560 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 MYCLP12524 364 aaPredicted RBP13.56□□□□□ -0.24
HERC3-207ENST00000452979 PGM5Q15124 567 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 SEC23AQ15436 765 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 IMMTQ16891 758 aaKnown RBP13.56□□□□□ -0.24
HERC3-207ENST00000452979 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
HERC3-207ENST00000452979 PLEKHM2Q8IWE5 1019 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 FAM178BQ8IXR5 827 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.56□□□□□ -0.24
HERC3-207ENST00000452979 SPATA33Q96N06 139 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 CNNM2Q9H8M5 875 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 CTNNA3Q9UI47 895 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
HERC3-207ENST00000452979 HIP1O00291 1037 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 ZBTB5O15062 677 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 GGPS1O95749 300 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 IGHDP01880 384 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 THPOP40225 353 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 TRAF1Q13077 416 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 IFIT1BQ5T764 474 aaKnown RBP13.55□□□□□ -0.24
HERC3-207ENST00000452979 FAM117BQ6P1L5 589 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 FBXO22Q8NEZ5 403 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 TOP1MTQ969P6 601 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 MRPL38Q96DV4 380 aaKnown RBP13.55□□□□□ -0.24
HERC3-207ENST00000452979 SAMD11Q96NU1 681 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 MAD2L2Q9UI95 211 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
HERC3-207ENST00000452979 C17orf102A2RUQ5 167 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 GRXCR2A6NFK2 248 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 H3BRB1 525 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 CAND2O75155 1236 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 UBA1P22314 1058 aaKnown RBP13.54□□□□□ -0.24
HERC3-207ENST00000452979 KCNA5P22460 613 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 CCND2P30279 289 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 HOXA13P31271 388 aaPredicted RBP13.54□□□□□ -0.24
HERC3-207ENST00000452979 PUS10Q3MIT2 529 aaKnown RBP13.54□□□□□ -0.24
HERC3-207ENST00000452979 EPC2Q52LR7 807 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 ERICH6BQ5W0A0 696 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms