RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 SPDYE16A6NNV3 312 aaPredicted RBP22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 SLC26A4O43511 780 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 COPB2P35606 906 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 FXR2P51116 673 aaKnown RBP eCLIP22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 ERVK-9P63128 1117 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 ERVK-24P63145 666 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 CCNA1P78396 465 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 KRBA2Q6ZNG9 492 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 CNNM3Q8NE01 707 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 REPS2Q8NFH8 660 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 CRYGNQ8WXF5 182 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 TMEM60Q9H2L4 133 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 TXNRD2Q9NNW7 524 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 STK24Q9Y6E0 443 aa22.09■■□□□ 1.13
HIGD1A-204ENST00000452906 FARP2O94887 1054 aaPredicted RBP22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 TDP2O95551 362 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 HOXA13P31271 388 aaPredicted RBP22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 ZNF76P36508 570 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 UBA7P41226 1012 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 Q4G0T1 1027 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 SNRNP48Q6IEG0 339 aaKnown RBP22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 LBX2Q6XYB7 198 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 POTEDQ86YR6 584 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 CEP57L1Q8IYX8 460 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 IQUBQ8NA54 791 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 TRERF1Q96PN7 1200 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 MTMR9Q96QG7 549 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 NUDT12Q9BQG2 462 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 PAGR1Q9BTK6 254 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 CCSER1Q9C0I3 900 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 MRVI1Q9Y6F6 885 aa22.08■■□□□ 1.13
HIGD1A-204ENST00000452906 XRCC5P13010 732 aaKnown RBP22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 GRIN1Q05586 938 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 PDIA5Q14554 519 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 FCHSD1Q86WN1 690 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 TRMT44Q8IYL2 757 aaKnown RBP22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 CLEC4DQ8WXI8 215 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 DEFB118Q96PH6 123 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 CRISPLD2Q9H0B8 497 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 MAGEF1Q9HAY2 307 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 RNF146Q9NTX7 359 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 FBXO40Q9UH90 709 aa22.07■■□□□ 1.12
HIGD1A-204ENST00000452906 POLR2DO15514 142 aaKnown RBP22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 SETQ01105 290 aaPredicted RBP22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 HABP4Q5JVS0 413 aaKnown RBP22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 CHST13Q8NET6 341 aa22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 RASSF8Q8NHQ8 419 aa22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 FAM20AQ96MK3 541 aa22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.06■■□□□ 1.129e-18■■■■□ 20.2
HIGD1A-204ENST00000452906 CUEDC2Q9H467 287 aa22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 ACAD9Q9H845 621 aa22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 ZNF214Q9UL59 606 aaPredicted RBP22.06■■□□□ 1.12
HIGD1A-204ENST00000452906 SLC37A4O43826 429 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 TFRCP02786 760 aaKnown RBP22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 SLFN14P0C7P3 912 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 STAT3P40763 770 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 STX1AQ16623 288 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 SPECC1Q5M775 1068 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 XRRA1Q6P2D8 792 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 RNF207Q6ZRF8 634 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 CKAP2LQ8IYA6 745 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 IGSF22Q8N9C0 903 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 EPSTI1Q96J88 318 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 FUCA2Q9BTY2 467 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 GRPEL1Q9HAV7 217 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 KIAA1468Q9P260 1216 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 TRIOBPQ9H2D6 2365 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 RPTORQ8N122 1335 aa22.05■■□□□ 1.12
HIGD1A-204ENST00000452906 H0YGN5 161 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 NFIBO00712 420 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 TXKP42681 527 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 TYRO3Q06418 890 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 TMEM132BQ14DG7 1078 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 IL17AQ16552 155 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 GPR142Q7Z601 462 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 DPF3Q92784 378 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 CALML4Q96GE6 196 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 HMX1Q9NP08 348 aaPredicted RBP22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 ANO10Q9NW15 660 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 LRWD1Q9UFC0 647 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 FRMPD4Q14CM0 1322 aa22.04■■□□□ 1.12
HIGD1A-204ENST00000452906 RGS2P41220 211 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 Q3C1V9 767 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 LONRF3Q496Y0 759 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 POTEEQ6S8J3 1075 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 NIPA1Q7RTP0 329 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 PLEKHH3Q7Z736 793 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 ANKLE1Q8NAG6 615 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 TRIB2Q92519 343 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 PORCNQ9H237 461 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 KCNMB3Q9NPA1 279 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 DISC1Q9NRI5 854 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 HOMER2Q9NSB8 354 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 PCDH10Q9P2E7 1040 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 PCDHA12Q9UN75 941 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 PFASO15067 1338 aa22.03■■□□□ 1.12
HIGD1A-204ENST00000452906 ALPK3Q96L96 1907 aa22.02■■□□□ 1.12
HIGD1A-204ENST00000452906 ACTN4O43707 911 aaKnown RBP22.02■■□□□ 1.12
HIGD1A-204ENST00000452906 PEX10O60683 326 aa22.02■■□□□ 1.12
HIGD1A-204ENST00000452906 SMC2O95347 1197 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms