RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 CENPKQ9BS16 269 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 IFIH1Q9BYX4 1025 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 LACRTQ9GZZ8 138 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 DCLRE1BQ9H816 532 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 ATP8A2Q9NTI2 1148 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 RBM12Q9NTZ6 932 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 ARL2BPQ9Y2Y0 163 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 MST1RQ04912 1400 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 UTYO14607 1347 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 STK36Q9NRP7 1315 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 TMEM221A6NGB7 291 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 CETN3O15182 167 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 FOXN1O15353 648 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 MMEP08473 750 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 SRGNP10124 158 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 CCNB1P14635 433 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 EIF2S2P20042 333 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 GSTT1P30711 240 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 MMP13P45452 471 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 RAD23BP54727 409 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 STX17P56962 302 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 DPYDQ12882 1025 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 HLTFQ14527 1009 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 DIXDC1Q155Q3 683 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 MTHFSDQ2M296 383 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 RASIP1Q5U651 963 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 TAOK1Q7L7X3 1001 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 ATXN2LQ8WWM7 1075 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 INPP5DQ92835 1189 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 ARHGEF1Q92888 912 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 PAGE5Q96GU1 130 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 ELAC2Q9BQ52 826 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 EDEM3Q9BZQ6 932 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 UNC45AQ9H3U1 944 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 CCDC87Q9NVE4 849 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 TUBA8Q9NY65 449 aaPredicted RBP9.16□□□□□ -0.94
SMCO1-202ENST00000452776 POGZQ7Z3K3 1410 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 SPATA31D1Q6ZQQ2 1576 aa9.16□□□□□ -0.94
SMCO1-202ENST00000452776 PALLDQ8WX93 1383 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 FAM208AQ9UK61 1670 aaKnown RBP9.15□□□□□ -0.94
SMCO1-202ENST00000452776 BTBD19C9JJ37 291 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 CCDC188H7C350 402 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 BIRC5O15392 142 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 CYP27B1O15528 508 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 SNX3O60493 162 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 UBOX5O94941 541 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 AGTP01019 485 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 TRIM21P19474 475 aaKnown RBP9.15□□□□□ -0.94
SMCO1-202ENST00000452776 VHLP40337 213 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 SESN3P58005 492 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 KCNJ2P63252 427 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 MUM1Q2TAK8 710 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 KRT71Q3SY84 523 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 TMEM259Q4ZIN3 620 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 SPDYAQ5MJ70 313 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF658Q5TYW1 1059 aaPredicted RBP9.15□□□□□ -0.94
SMCO1-202ENST00000452776 RRAGBQ5VZM2 374 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 RALYLQ86SE5 291 aaKnown RBP9.15□□□□□ -0.94
SMCO1-202ENST00000452776 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.94
SMCO1-202ENST00000452776 STK11IPQ8N1F8 1099 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 PPFIBP2Q8ND30 876 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF507Q8TCN5 953 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 ASAP3Q8TDY4 903 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 TAF4BQ92750 862 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 NEUROD6Q96NK8 337 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.94
SMCO1-202ENST00000452776 TRPV5Q9NQA5 729 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 TAB2Q9NYJ8 693 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 PDS5AQ29RF7 1337 aaKnown RBP9.15□□□□□ -0.94
SMCO1-202ENST00000452776 MROH7Q68CQ1 1323 aa9.15□□□□□ -0.94
SMCO1-202ENST00000452776 PI4KAP2A4QPH2 592 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 RNF225M0QZC1 329 aaPredicted RBP9.15□□□□□ -0.95
SMCO1-202ENST00000452776 GJB6O95452 261 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 KRT16P08779 473 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 TROVE2P10155 538 aaKnown RBP eCLIP9.15□□□□□ -0.95
SMCO1-202ENST00000452776 FBLN1P23142 703 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 PDE6BP35913 854 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 IARSP41252 1262 aaKnown RBP9.15□□□□□ -0.95
SMCO1-202ENST00000452776 OCRLQ01968 901 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 SULT2A1Q06520 285 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 MPP3Q13368 585 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 LSAMPQ13449 338 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 CLUL1Q15846 466 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF827Q17R98 1081 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 KLC3Q6P597 504 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 BTNL9Q6UXG8 535 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 BICDL1Q6ZP65 573 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 UNC13DQ70J99 1090 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 NME9Q86XW9 330 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 CCDC65Q8IXS2 484 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 SPICE1Q8N0Z3 855 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 PI4KAP1Q8N8J0 262 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 LINS1Q8NG48 757 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms