RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 C7orf31Q8N865 590 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 CAGE1Q8TC20 777 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 ATXN2LQ8WWM7 1075 aaKnown RBP21.27■■□□□ 1
PDLIM2-214ENST00000452226 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 PPM1EQ8WY54 764 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 CTAGE1Q96RT6 745 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 PRDM6Q9NQX0 595 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 SH2B2O14492 632 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 EPB41L2O43491 1005 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 SORBS3O60504 671 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 ZNF286BP0CG31 522 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 IGFBP4P22692 258 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 LIFRP42702 1097 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 CELF3Q5SZQ8 465 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 MYSM1Q5VVJ2 828 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 PPP2R2DQ66LE6 453 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 TMTC2Q8N394 836 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 ZFP91Q96JP5 570 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 NEK1Q96PY6 1258 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 MAP3K14Q99558 947 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 ALG1Q9BT22 464 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 KATNAL1Q9BW62 490 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 TSPYL2Q9H2G4 693 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 HDAC6Q9UBN7 1215 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 GTF2IRD1Q9UHL9 959 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 TRANK1O15050 2925 aa21.26■□□□□ 0.99
PDLIM2-214ENST00000452226 REC8O95072 547 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 GGPS1O95749 300 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 F2P00734 622 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 HSPA4P34932 840 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 EXOSC10Q01780 885 aaKnown RBP21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 ADGRE1Q14246 886 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 KRT32Q14532 448 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 MFSD10Q14728 455 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 KIAA0753Q2KHM9 967 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 ADCK5Q3MIX3 580 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 ZNF654Q8IZM8 581 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 IL27Q8NEV9 243 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 AFAP1L1Q8TED9 768 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 DHX38Q92620 1227 aaKnown RBP21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 SPATA33Q96N06 139 aa21.25■□□□□ 0.99
PDLIM2-214ENST00000452226 HAS3O00219 553 aa21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 PPFIA4O75335 1185 aa21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 TGFB3P10600 412 aa21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 HOXD8P13378 290 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 UBA1P22314 1058 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 SP2Q02086 613 aa21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 CTCFLQ8NI51 663 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 SLC9A7Q96T83 725 aa21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 MYL10Q9BUA6 226 aa21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 THEGQ9P2T0 379 aa21.24■□□□□ 0.99
PDLIM2-214ENST00000452226 TNFRSF10AO00220 468 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 DDAH1O94760 285 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 SELPP16109 830 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 KIF5BP33176 963 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 HSDL1Q3SXM5 330 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 LRRC8DQ7L1W4 858 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 DHX32Q7L7V1 743 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 SGMS1Q86VZ5 419 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 GPKOWQ92917 476 aaPredicted RBP eCLIP21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 RRP36Q96EU6 259 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 SPZ1Q9BXG8 430 aa21.23■□□□□ 0.99
PDLIM2-214ENST00000452226 DOCK5Q9H7D0 1870 aa21.22■□□□□ 0.99
PDLIM2-214ENST00000452226 RBL2Q08999 1139 aa21.22■□□□□ 0.99
PDLIM2-214ENST00000452226 NFXL1Q6ZNB6 911 aa21.22■□□□□ 0.99
PDLIM2-214ENST00000452226 PHOSPHO2Q8TCD6 241 aa21.22■□□□□ 0.99
PDLIM2-214ENST00000452226 LRRC2Q9BYS8 371 aa21.22■□□□□ 0.99
PDLIM2-214ENST00000452226 MLXIPQ9HAP2 919 aa21.22■□□□□ 0.99
PDLIM2-214ENST00000452226 SNX14Q9Y5W7 946 aa21.22■□□□□ 0.99
PDLIM2-214ENST00000452226 BAIAP3O94812 1187 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 CA3P07451 260 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 CKBP12277 381 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 MRPS5P82675 430 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 PTK7Q13308 1070 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 GPNMBQ14956 572 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 CCDC85BQ15834 202 aaPredicted RBP21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 USP26Q9BXU7 913 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 FRMPD4Q14CM0 1322 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 PTPRSQ13332 1948 aa21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 PRRC2BQ5JSZ5 2229 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-214ENST00000452226 CCDC69A6NI79 296 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 STAM2O75886 525 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 PARNO95453 639 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 HMGB1P09429 215 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 SMARCA1P28370 1054 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 MRPS9P82933 396 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 ZNF200P98182 395 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 GNPTABQ3T906 1256 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 HERC6Q8IVU3 1022 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 ASB2Q96Q27 587 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 LZTS2Q9BRK4 669 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 SEC63Q9UGP8 760 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 REV3LO60673 3130 aa21.2■□□□□ 0.98
PDLIM2-214ENST00000452226 NCOR1O75376 2440 aa21.19■□□□□ 0.98
PDLIM2-214ENST00000452226 PLEKHA8P1O95397 391 aa21.19■□□□□ 0.98
PDLIM2-214ENST00000452226 KCNJ6P48051 423 aa21.19■□□□□ 0.98
PDLIM2-214ENST00000452226 GNAQP50148 359 aa21.19■□□□□ 0.98
PDLIM2-214ENST00000452226 USP17L6PQ6QN14 398 aa21.19■□□□□ 0.98
PDLIM2-214ENST00000452226 SMARCC2Q8TAQ2 1214 aa21.19■□□□□ 0.98
PDLIM2-214ENST00000452226 CUL5Q93034 780 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms