RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 SIT1Q9Y3P8 196 aa5.62□□□□□ -1.51
VPS8-211ENST00000452140 X6R8D5 127 aa5.62□□□□□ -1.51
VPS8-211ENST00000452140 ZNF891A8MT65 544 aaPredicted RBP5.61□□□□□ -1.51
VPS8-211ENST00000452140 B4E1Z4 1266 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 NKRFO15226 690 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS8-211ENST00000452140 PDE6AP16499 860 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 POU3F3P20264 500 aaPredicted RBP5.61□□□□□ -1.51
VPS8-211ENST00000452140 POU3F2P20265 443 aaPredicted RBP5.61□□□□□ -1.51
VPS8-211ENST00000452140 IBSPP21815 317 aaPredicted RBP5.61□□□□□ -1.51
VPS8-211ENST00000452140 STRN3Q13033 797 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 TMEM177Q53S58 311 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 WWC2Q6AWC2 1192 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 OVCH1Q7RTY7 1134 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 NXPE1Q8N323 547 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 EPB41L1Q9H4G0 881 aa5.61□□□□□ -1.51
VPS8-211ENST00000452140 CBX4O00257 560 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 WNT9AO14904 365 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 DGKIO75912 1065 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 GLI4P10075 376 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 JAM2P57087 298 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 EVA1CP58658 441 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 NFKB2Q00653 900 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 FSTL4Q6MZW2 842 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 OSTM1Q86WC4 334 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 PTRH1Q86Y79 214 aaKnown RBP5.6□□□□□ -1.51
VPS8-211ENST00000452140 RBM12BQ8IXT5 1001 aaKnown RBP5.6□□□□□ -1.51
VPS8-211ENST00000452140 LILRA2Q8N149 483 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 AHI1Q8N157 1196 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 AFAP1L2Q8N4X5 818 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 FLAD1Q8NFF5 587 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS8-211ENST00000452140 KIRREL1Q96J84 757 aa5.6□□□□□ -1.51
VPS8-211ENST00000452140 NOP58Q9Y2X3 529 aaKnown RBP5.6□□□□□ -1.51
VPS8-211ENST00000452140 TCRBV5S4A2TA0A5A2 114 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 ZC3H12DA2A288 527 aaKnown RBP5.59□□□□□ -1.51
VPS8-211ENST00000452140 NUDT19A8MXV4 375 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 TRAF5O00463 557 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 KRT37O76014 449 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 AMY2AP04746 511 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 PNLIPP16233 465 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 AMY2BP19961 511 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 CDKN1CP49918 316 aaPredicted RBP5.59□□□□□ -1.51
VPS8-211ENST00000452140 ANAPC15P60006 121 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 IGBP1P78318 339 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 SPIRE1Q08AE8 756 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 CRY1Q16526 586 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 ADGRF1Q5T601 910 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 MROH9Q5TGP6 573 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 DDX46Q7L014 1031 aaKnown RBP5.59□□□□□ -1.51
VPS8-211ENST00000452140 C16orf59Q7L2K0 433 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 OTOP3Q7RTS5 596 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 CABP7Q86V35 215 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 DDX42Q86XP3 938 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS8-211ENST00000452140 ANKRD13AQ8IZ07 590 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 CHST14Q8NCH0 376 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 CD244Q9BZW8 370 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 TMX1Q9H3N1 280 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS8-211ENST00000452140 SMURF1Q9HCE7 757 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 TNFRSF12AQ9NP84 129 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 HCFC2Q9Y5Z7 792 aa5.59□□□□□ -1.51
VPS8-211ENST00000452140 ZNF561-AS1K7EIQ3 104 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 GSTA4O15217 222 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 DBHP09172 617 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 JUNBP17275 347 aaPredicted RBP5.58□□□□□ -1.52
VPS8-211ENST00000452140 ARL4AP40617 200 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 AFMP43652 599 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 ID4P47928 161 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 MECP2P51608 486 aaKnown RBP5.58□□□□□ -1.52
VPS8-211ENST00000452140 STEAP3Q658P3 488 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 ARHGAP36Q6ZRI8 547 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 LHFPL2Q6ZUX7 228 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 CBLL1Q75N03 491 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 RIOX2Q8IUF8 465 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
VPS8-211ENST00000452140 C2orf69Q8N8R5 385 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 SH3RF2Q8TEC5 729 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 CABP5Q9NP86 173 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 CRTAC1Q9NQ79 661 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 ATP8A1Q9Y2Q0 1164 aa5.58□□□□□ -1.52
VPS8-211ENST00000452140 YBX2Q9Y2T7 364 aaKnown RBP5.58□□□□□ -1.52
VPS8-211ENST00000452140 PTPDC1A2A3K4 754 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 F8W031 263 aaPredicted RBP5.57□□□□□ -1.52
VPS8-211ENST00000452140 SLC27A2O14975 620 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 SGSM2O43147 1006 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 LTFP02788 710 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 PDE6BP35913 854 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 SCNN1BP51168 640 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 FAM50AQ14320 339 aaKnown RBP5.57□□□□□ -1.52
VPS8-211ENST00000452140 SNX17Q15036 470 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 GPR19Q15760 415 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 HABP4Q5JVS0 413 aaKnown RBP5.57□□□□□ -1.52
VPS8-211ENST00000452140 CPZQ66K79 652 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
VPS8-211ENST00000452140 OR2W6PQ8NHA6 318 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 ATL2Q8NHH9 583 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 INTS4Q96HW7 963 aaKnown RBP5.57□□□□□ -1.52
VPS8-211ENST00000452140 GPR101Q96P66 508 aaPredicted RBP5.57□□□□□ -1.52
VPS8-211ENST00000452140 BRINP2Q9C0B6 783 aa5.57□□□□□ -1.52
VPS8-211ENST00000452140 BCAS3Q9H6U6 928 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms