RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 SESTD1Q86VW0 696 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 SKAP1Q86WV1 359 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 MICU3Q86XE3 530 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 RAB11FIP4Q86YS3 637 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 CCDC82Q8N4S0 544 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 KAT2BQ92831 832 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 RTEL1Q9NZ71 1219 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 RGS20O76081 388 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 UBA1P22314 1058 aaKnown RBP25.28■■□□□ 1.64
CPSF7-208ENST00000450000 FGD1P98174 961 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 NEDD9Q14511 834 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 KRT32Q14532 448 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 GDF6Q6KF10 455 aaPredicted RBP25.28■■□□□ 1.64
CPSF7-208ENST00000450000 NLRX1Q86UT6 975 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.28■■□□□ 1.64
CPSF7-208ENST00000450000 CMTR1Q8N1G2 835 aaKnown RBP25.28■■□□□ 1.64
CPSF7-208ENST00000450000 SRBD1Q8N5C6 995 aaKnown RBP25.28■■□□□ 1.64
CPSF7-208ENST00000450000 FANCBQ8NB91 859 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 AFAP1L1Q8TED9 768 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 PSTPIP2Q9H939 334 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 HDAC6Q9UBN7 1215 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 GTF2IRD1Q9UHL9 959 aa25.28■■□□□ 1.64
CPSF7-208ENST00000450000 ATP2A2P16615 1042 aaKnown RBP25.27■■□□□ 1.64
CPSF7-208ENST00000450000 USP17L6PQ6QN14 398 aa25.27■■□□□ 1.64
CPSF7-208ENST00000450000 FIBPO43427 364 aa25.26■■□□□ 1.63
CPSF7-208ENST00000450000 F2P00734 622 aa25.26■■□□□ 1.63
CPSF7-208ENST00000450000 HSDL1Q3SXM5 330 aa25.26■■□□□ 1.63
CPSF7-208ENST00000450000 XRRA1Q6P2D8 792 aa25.26■■□□□ 1.63
CPSF7-208ENST00000450000 NKX2-4Q9H2Z4 354 aa25.26■■□□□ 1.63
CPSF7-208ENST00000450000 RBM28Q9NW13 759 aaKnown RBP25.26■■□□□ 1.63
CPSF7-208ENST00000450000 NAP1L2Q9ULW6 460 aaPredicted RBP25.26■■□□□ 1.63
CPSF7-208ENST00000450000 SPDYE3A6NKU9 549 aa25.25■■□□□ 1.63
CPSF7-208ENST00000450000 PARNO95453 639 aaKnown RBP25.25■■□□□ 1.63
CPSF7-208ENST00000450000 SELPP16109 830 aa25.25■■□□□ 1.63
CPSF7-208ENST00000450000 DHX32Q7L7V1 743 aaKnown RBP25.25■■□□□ 1.63
CPSF7-208ENST00000450000 HEATR3Q7Z4Q2 680 aa25.25■■□□□ 1.63
CPSF7-208ENST00000450000 EHMT1Q9H9B1 1298 aa25.25■■□□□ 1.63
CPSF7-208ENST00000450000 SCN10AQ9Y5Y9 1956 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 PIK3CDO00329 1044 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 KCNJ6P48051 423 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 SP2Q02086 613 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 PCNX4Q63HM2 1172 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 TMTC3Q6ZXV5 915 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 LRRC8DQ7L1W4 858 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 SGMS1Q86VZ5 419 aa25.24■■□□□ 1.63
CPSF7-208ENST00000450000 hCG_1642624A0A1W2PR95 340 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 KIF28PB7ZC32 967 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 HMGB1P09429 215 aaKnown RBP25.23■■□□□ 1.63
CPSF7-208ENST00000450000 ICAM3P32942 547 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 RABGGTBP53611 331 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 MRPS9P82933 396 aaKnown RBP25.23■■□□□ 1.63
CPSF7-208ENST00000450000 PTK7Q13308 1070 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 PPP2R2DQ66LE6 453 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 METTL7BQ6UX53 244 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 CYFIP1Q7L576 1253 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 GIMAP8Q8ND71 665 aaPredicted RBP25.23■■□□□ 1.63
CPSF7-208ENST00000450000 GPKOWQ92917 476 aaPredicted RBP eCLIP25.23■■□□□ 1.633e-7■■■■□ 21.6
CPSF7-208ENST00000450000 INPP4AQ96PE3 977 aaPredicted RBP25.23■■□□□ 1.63
CPSF7-208ENST00000450000 SLC9A7Q96T83 725 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 USP26Q9BXU7 913 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 PCDHA11Q9Y5I1 949 aa25.23■■□□□ 1.63
CPSF7-208ENST00000450000 FRMPD4Q14CM0 1322 aa25.22■■□□□ 1.63
CPSF7-208ENST00000450000 SPATA31C2B4DYI2 1134 aa25.22■■□□□ 1.63
CPSF7-208ENST00000450000 HAS3O00219 553 aa25.22■■□□□ 1.63
CPSF7-208ENST00000450000 ZBTB43O43298 467 aa25.22■■□□□ 1.63
CPSF7-208ENST00000450000 RTN1Q16799 776 aa25.22■■□□□ 1.63
CPSF7-208ENST00000450000 CDHR1Q96JP9 859 aa25.22■■□□□ 1.63
CPSF7-208ENST00000450000 PRDM12Q9H4Q4 367 aa25.22■■□□□ 1.63
CPSF7-208ENST00000450000 ZNF215Q9UL58 517 aaPredicted RBP25.22■■□□□ 1.63
CPSF7-208ENST00000450000 BAZ2BQ9UIF8 2168 aaKnown RBP25.22■■□□□ 1.63
CPSF7-208ENST00000450000 C17orf102A2RUQ5 167 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 H3BRB1 525 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 MEIS2O14770 477 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 BAIAP3O94812 1187 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 NEFLP07196 543 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 HOXD8P13378 290 aaPredicted RBP25.21■■□□□ 1.63
CPSF7-208ENST00000450000 IGFBP4P22692 258 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 SP4Q02446 784 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 PHOSPHO2Q8TCD6 241 aa25.21■■□□□ 1.63
CPSF7-208ENST00000450000 TUT1Q9H6E5 874 aaKnown RBP25.21■■□□□ 1.63
CPSF7-208ENST00000450000 KIAA1217Q5T5P2 1943 aa25.2■■□□□ 1.62
CPSF7-208ENST00000450000 LGALS2P05162 132 aa25.2■■□□□ 1.62
CPSF7-208ENST00000450000 GNAT1P11488 350 aa25.2■■□□□ 1.62
CPSF7-208ENST00000450000 CKBP12277 381 aa25.2■■□□□ 1.62
CPSF7-208ENST00000450000 APOA5Q6Q788 366 aa25.2■■□□□ 1.62
CPSF7-208ENST00000450000 PPM1EQ8WY54 764 aa25.2■■□□□ 1.62
CPSF7-208ENST00000450000 TCEANC2Q96MN5 208 aa25.2■■□□□ 1.62
CPSF7-208ENST00000450000 YBX2Q9Y2T7 364 aaKnown RBP25.2■■□□□ 1.62
CPSF7-208ENST00000450000 GOLGA8AA7E2F4 631 aa25.19■■□□□ 1.62
CPSF7-208ENST00000450000 GOLGA8BA8MQT2 603 aa25.19■■□□□ 1.62
CPSF7-208ENST00000450000 NAPAP54920 295 aa25.19■■□□□ 1.62
CPSF7-208ENST00000450000 TSGA10IPQ3SY00 556 aa25.19■■□□□ 1.62
CPSF7-208ENST00000450000 UTP14CQ5TAP6 766 aaKnown RBP25.19■■□□□ 1.62
CPSF7-208ENST00000450000 ATP6V0A1Q93050 837 aa25.19■■□□□ 1.62
CPSF7-208ENST00000450000 SENP7Q9BQF6 1050 aa25.19■■□□□ 1.62
CPSF7-208ENST00000450000 C16orf70Q9BSU1 422 aa25.19■■□□□ 1.62
CPSF7-208ENST00000450000 KLF18A0A0U1RQI7 1052 aa25.18■■□□□ 1.62
CPSF7-208ENST00000450000 COL9A3Q14050 684 aaPredicted RBP25.18■■□□□ 1.62
CPSF7-208ENST00000450000 UBE2SQ16763 222 aa25.18■■□□□ 1.62
CPSF7-208ENST00000450000 GPRASP2Q96D09 838 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms