RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MEIS2O14770 477 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 PPFIA4O75335 1185 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 UBA1P22314 1058 aaKnown RBP17.58■□□□□ 0.4
CHD3-205ENST00000449744 DNAJB2P25686 324 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 RTN1Q16799 776 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 RASIP1Q5U651 963 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 OTOP2Q7RTS6 562 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 SESTD1Q86VW0 696 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 CCDC155Q8N6L0 562 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 NAP1L2Q9ULW6 460 aaPredicted RBP17.58■□□□□ 0.4
CHD3-205ENST00000449744 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 FIBPO43427 364 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 PFKMP08237 780 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 ZNF286BP0CG31 522 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 MRPS9P82933 396 aaKnown RBP17.57■□□□□ 0.4
CHD3-205ENST00000449744 SP2Q02086 613 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 NEDD9Q14511 834 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 MFSD10Q14728 455 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 XRRA1Q6P2D8 792 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 HEATR3Q7Z4Q2 680 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 DEFB128Q7Z7B8 93 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 NLRX1Q86UT6 975 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 GPKOWQ92917 476 aaPredicted RBP eCLIP17.57■□□□□ 0.4
CHD3-205ENST00000449744 INPP4AQ96PE3 977 aaPredicted RBP17.57■□□□□ 0.4
CHD3-205ENST00000449744 CDX2Q99626 313 aaPredicted RBP17.57■□□□□ 0.4
CHD3-205ENST00000449744 TTYH1Q9H313 450 aaPredicted RBP17.57■□□□□ 0.4
CHD3-205ENST00000449744 BRPF3Q9ULD4 1205 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 MYH7BA7E2Y1 1941 aa17.57■□□□□ 0.4
CHD3-205ENST00000449744 KLF18A0A0U1RQI7 1052 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 GOLGA8AA7E2F4 631 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 ZBBXA8MT70 800 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 GRXCR1A8MXD5 290 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 NOP56O00567 594 aaKnown RBP17.56■□□□□ 0.4
CHD3-205ENST00000449744 REC8O95072 547 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 F2P00734 622 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 IQCF3P0C7M6 154 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 ACTN1P12814 892 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 ICAM3P32942 547 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 RFC2P35250 354 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 PCNX4Q63HM2 1172 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 GDF6Q6KF10 455 aaPredicted RBP17.56■□□□□ 0.4
CHD3-205ENST00000449744 CAGE1Q8TC20 777 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 TIFAQ96CG3 184 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 CXXC1Q9P0U4 656 aaPredicted RBP17.56■□□□□ 0.4
CHD3-205ENST00000449744 HDAC6Q9UBN7 1215 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 GTF2IRD1Q9UHL9 959 aa17.56■□□□□ 0.4
CHD3-205ENST00000449744 SPDYE3A6NKU9 549 aa17.55■□□□□ 0.4
CHD3-205ENST00000449744 SPATA31C2B4DYI2 1134 aa17.55■□□□□ 0.4
CHD3-205ENST00000449744 HOXD8P13378 290 aaPredicted RBP17.55■□□□□ 0.4
CHD3-205ENST00000449744 HSPA4P34932 840 aa17.55■□□□□ 0.4
CHD3-205ENST00000449744 JAKMIP1Q96N16 626 aaKnown RBP17.55■□□□□ 0.4
CHD3-205ENST00000449744 PBX4Q9BYU1 374 aa17.55■□□□□ 0.4
CHD3-205ENST00000449744 MSRAQ9UJ68 235 aa17.55■□□□□ 0.4
CHD3-205ENST00000449744 SLC4A7Q9Y6M7 1214 aa17.55■□□□□ 0.4
CHD3-205ENST00000449744 A0A0C4DFX4 3053 aa17.55■□□□□ 0.4
CHD3-205ENST00000449744 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 HAS3O00219 553 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 NAPAP54920 295 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 RAB30Q15771 203 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 UBE2SQ16763 222 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 BLOC1S2Q6QNY1 142 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 METTL7BQ6UX53 244 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 CYFIP1Q7L576 1253 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 KCNB2Q92953 911 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 FTOQ9C0B1 505 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHD3-205ENST00000449744 EHMT1Q9H9B1 1298 aa17.54■□□□□ 0.4
CHD3-205ENST00000449744 CPA1P15085 419 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 PBX2P40425 430 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 RCAN1P53805 252 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 WWC2Q6AWC2 1192 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 Q6ZUG5 572 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 AFAP1L1Q8TED9 768 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 CDHR1Q96JP9 859 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 ZNF576Q9H609 170 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 PCDHA6Q9UN73 950 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 PCDHA8Q9Y5H6 950 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 SNX14Q9Y5W7 946 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
CHD3-205ENST00000449744 CUL9Q8IWT3 2517 aa17.53■□□□□ 0.4
CHD3-205ENST00000449744 CCDC196A0A1B0GTZ2 297 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 H3BRB1 525 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 hCG_1984214I3L0E3 225 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 LGALS2P05162 132 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 FOSL2P15408 326 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 PSMA5P28066 241 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 METAP2P50579 478 aaKnown RBP eCLIP17.52■□□□□ 0.4
CHD3-205ENST00000449744 SP4Q02446 784 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 SEMA3FQ13275 785 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 PTK7Q13308 1070 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 PPP1R18Q6NYC8 613 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 ZNF713Q8N859 430 aaPredicted RBP17.52■□□□□ 0.4
CHD3-205ENST00000449744 GIMAP8Q8ND71 665 aaPredicted RBP17.52■□□□□ 0.4
CHD3-205ENST00000449744 GPRASP2Q96D09 838 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 SENP7Q9BQF6 1050 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 C16orf70Q9BSU1 422 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 USP26Q9BXU7 913 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms