RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 TRIM29Q14134 588 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 IQSEC1Q6DN90 963 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 XRRA1Q6P2D8 792 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 CCDC62Q6P9F0 684 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 TBCKQ8TEA7 893 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
SMPD4-211ENST00000449159 UBIAD1Q9Y5Z9 338 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 CUL9Q8IWT3 2517 aa12.13□□□□□ -0.47
SMPD4-211ENST00000449159 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 CTAGE5O15320 804 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 CYP3A4P08684 503 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
SMPD4-211ENST00000449159 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-211ENST00000449159 SP2Q02086 613 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 TTLL4Q14679 1199 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 INF2Q27J81 1249 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 TLK2Q86UE8 772 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 DIS3LQ8TF46 1054 aaKnown RBP12.12□□□□□ -0.47
SMPD4-211ENST00000449159 PKD2L1Q9P0L9 805 aa12.12□□□□□ -0.47
SMPD4-211ENST00000449159 DDX41Q9UJV9 622 aaKnown RBP12.12□□□□□ -0.47
SMPD4-211ENST00000449159 LTBP2Q14767 1821 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 WDR81Q562E7 1941 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 IGLV3-22A0A075B6J6 115 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 SPATA31C2B4DYI2 1134 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 KIF28PB7ZC32 967 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-211ENST00000449159 STAM2O75886 525 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-211ENST00000449159 ARP10275 920 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 ICAM3P32942 547 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 GJA9P57773 515 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 BEX3Q00994 111 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 ARHGAP1Q07960 439 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 NONOQ15233 471 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMPD4-211ENST00000449159 LRRC41Q15345 812 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 CEP55Q53EZ4 464 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 NECAB2Q7Z6G3 386 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 NLRX1Q86UT6 975 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 INTS4Q96HW7 963 aaKnown RBP12.11□□□□□ -0.47
SMPD4-211ENST00000449159 PAWRQ96IZ0 340 aaKnown RBP12.11□□□□□ -0.47
SMPD4-211ENST00000449159 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 UPF3AQ9H1J1 476 aaKnown RBP12.11□□□□□ -0.47
SMPD4-211ENST00000449159 BRMS1Q9HCU9 246 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 TELO2Q9Y4R8 837 aa12.11□□□□□ -0.47
SMPD4-211ENST00000449159 MEIS1O00470 390 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 SOX1O00570 391 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-211ENST00000449159 WNT7AO00755 349 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 FIBPO43427 364 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 ATP9AO75110 1047 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 TDP2O95551 362 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 GGPS1O95749 300 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 ZNF76P36508 570 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 MTMR1Q13613 665 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 SAFBQ15424 915 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMPD4-211ENST00000449159 PRR16Q569H4 304 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 C7orf61Q8IZ16 206 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 LENG9Q96B70 501 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 GPRASP2Q96D09 838 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 AP5M1Q9H0R1 490 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 KCNH7Q9NS40 1196 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 KIF3AQ9Y496 699 aa12.1□□□□□ -0.47
SMPD4-211ENST00000449159 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 NKRFO15226 690 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMPD4-211ENST00000449159 GH1P01241 217 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 KCNA2P16389 499 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 CIITAP33076 1130 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 USP11P51784 963 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 FSCN1Q16658 493 aaKnown RBP12.09□□□□□ -0.47
SMPD4-211ENST00000449159 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 LARP1BQ659C4 914 aaKnown RBP12.09□□□□□ -0.47
SMPD4-211ENST00000449159 CCSAPQ6IQ19 270 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-211ENST00000449159 PLA2G4DQ86XP0 818 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 ARRDC4Q8NCT1 418 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 KLHDC9Q8NEP7 349 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 AFG1LQ8WV93 481 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 GJA10Q969M2 543 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 AGO4Q9HCK5 861 aaKnown RBP12.09□□□□□ -0.47
SMPD4-211ENST00000449159 EYSQ5T1H1 3165 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 SCN10AQ9Y5Y9 1956 aa12.09□□□□□ -0.47
SMPD4-211ENST00000449159 KBTBD13C9JR72 458 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 H3BQV1 296 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 DNM1LO00429 736 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 SLC37A4O43826 429 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms