RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PIK3AP1Q6ZUJ8 805 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 HIPK3Q9H422 1215 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZNHIT6Q9NWK9 470 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 MEI4A8MW99 385 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 ARL1P40616 181 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 ASIC1P78348 528 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 CALCRLQ16602 461 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 AASDHQ4L235 1098 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZNF449Q6P9G9 518 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 MSANTD4Q8NCY6 345 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PCDHB15Q9Y5E8 787 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PNMA6FA0A0J9YX94 578 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 NKRFO15226 690 aaKnown RBP eCLIP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 HOXA2O43364 376 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 OR1G1P47890 313 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PPP4CP60510 307 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 CRHR2Q13324 411 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 FAM102BQ5T8I3 360 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 GALNT17Q6IS24 598 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PSRC1Q6PGN9 363 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PGBD4Q96DM1 585 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 CEP170P1Q96L14 293 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 THG1LQ9NWX6 298 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 TLR7Q9NYK1 1049 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 BTBD19C9JJ37 291 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 CHMLP26374 656 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 LMAN1P49257 510 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 TMEM132BQ14DG7 1078 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 RRAGBQ5VZM2 374 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 PIGSQ96S52 555 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 GCOM2Q9BZD3 368 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 LARSQ9P2J5 1176 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 KCNA5P22460 613 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 CTNNA2P26232 953 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 ADORA2AP29274 412 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 CYP2C19P33261 490 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 SNAP25P60880 206 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 LMBRD2Q68DH5 695 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 MFSD14AQ96MC6 490 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 CDV3Q9UKY7 258 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 MAGED2Q9UNF1 606 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 DDX49Q9Y6V7 483 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 RPS6KA5O75582 802 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 SRGAP2CP0DJJ0 459 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 ATP2A2P16615 1042 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 SFPQP23246 707 aaKnown RBP eCLIP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 HOXA13P31271 388 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 ALDH1A3P47895 512 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 MTMR1Q13613 665 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 KIZQ2M2Z5 673 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 C12orf60Q5U649 245 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 CCDC65Q8IXS2 484 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 SNX29Q8TEQ0 813 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 TCP11Q8WWU5 503 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 TIFAQ96CG3 184 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 CCDC94Q9BW85 323 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 KIAA1683Q9H0B3 1180 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 FZD1Q9UP38 647 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 NR2E1Q9Y466 385 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 DAPK3O43293 454 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 P4HA1P13674 534 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 VCAM1P19320 739 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 MTERF2Q49AM1 385 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 SEC62Q99442 399 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 IDI2Q9BXS1 227 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 PANK2Q9BZ23 570 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 hCG_1642624A0A1W2PR95 340 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZBTB5O15062 677 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 TRAPPC3O43617 180 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 HOXC6P09630 235 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 POTEIP0CG38 1075 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 MAFAQ8NHW3 353 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 MTG1Q9BT17 334 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 RTFDC1Q9BY42 306 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 PUS7LQ9H0K6 701 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 KRT76Q01546 638 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 ATAT1Q5SQI0 421 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 TMEM47Q9BQJ4 181 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 TBC1D22BQ9NU19 505 aa6.24□□□□□ -1.41
CDC42BPA-209ENST00000448940 PRR23AA6NEV1 266 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 BRD1O95696 1058 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SCG2P13521 617 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PTPREP23469 700 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 COLEC12Q5KU26 742 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 LRRC69Q6ZNQ3 347 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SHDQ96IW2 340 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 LARP6Q9BRS8 491 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 TOPORSQ9NS56 1045 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PCDHA12Q9UN75 941 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 FAM47DPA6NHR8 397 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 CAPN9O14815 690 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 CYP2C9P11712 490 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 LIG4P49917 911 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 VPS36Q86VN1 386 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SCN4BQ8IWT1 228 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SMARCAD1Q9H4L7 1026 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 RRN3P2A6NIE6 340 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 E7EWF7 191 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PGK2P07205 417 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms