RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 MLXIPQ9HAP2 919 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 RTEL1Q9NZ71 1219 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 GBF1Q92538 1859 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 PIK3CDO00329 1044 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 MEIS2O14770 477 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 ZBTB43O43298 467 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 STAM2O75886 525 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 DNAJB2P25686 324 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 HSDL1Q3SXM5 330 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 GDF6Q6KF10 455 aaPredicted RBP20.38■□□□□ 0.85
DDX56-207ENST00000448192 HEATR3Q7Z4Q2 680 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 DEFB128Q7Z7B8 93 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 C7orf31Q8N865 590 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 SLC17A8Q8NDX2 589 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 CDX2Q99626 313 aaPredicted RBP20.38■□□□□ 0.85
DDX56-207ENST00000448192 KATNAL1Q9BW62 490 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 CXXC1Q9P0U4 656 aaPredicted RBP20.38■□□□□ 0.85
DDX56-207ENST00000448192 BRPF3Q9ULD4 1205 aa20.38■□□□□ 0.85
DDX56-207ENST00000448192 PPFIA4O75335 1185 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 HMGB1P09429 215 aaKnown RBP20.37■□□□□ 0.85
DDX56-207ENST00000448192 FGD1P98174 961 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 BFSP2Q13515 415 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 MFSD10Q14728 455 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 RTN1Q16799 776 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 KIAA0753Q2KHM9 967 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 SESTD1Q86VW0 696 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 RBM28Q9NW13 759 aaKnown RBP20.37■□□□□ 0.85
DDX56-207ENST00000448192 HDAC6Q9UBN7 1215 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 NAP1L2Q9ULW6 460 aaPredicted RBP20.37■□□□□ 0.85
DDX56-207ENST00000448192 CDH23Q9H251 3354 aa20.37■□□□□ 0.85
DDX56-207ENST00000448192 KLF18A0A0U1RQI7 1052 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 PITPNM1O00562 1244 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 F2P00734 622 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 CPA1P15085 419 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 PBX2P40425 430 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 PCNX4Q63HM2 1172 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 CCDC155Q8N6L0 562 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 TIFAQ96CG3 184 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 INPP4AQ96PE3 977 aaPredicted RBP20.36■□□□□ 0.85
DDX56-207ENST00000448192 BCAS3Q9H6U6 928 aa20.36■□□□□ 0.85
DDX56-207ENST00000448192 TMEM265A0A087WTH1 108 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 ZBBXA8MT70 800 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 SPATA31C2B4DYI2 1134 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 FIBPO43427 364 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 IQCF3P0C7M6 154 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 HOXD8P13378 290 aaPredicted RBP20.35■□□□□ 0.85
DDX56-207ENST00000448192 ICAM3P32942 547 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 UBE2SQ16763 222 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 MYLIPQ8WY64 445 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 VWCEQ96DN2 955 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 JAKMIP1Q96N16 626 aaKnown RBP20.35■□□□□ 0.85
DDX56-207ENST00000448192 PBX4Q9BYU1 374 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 GTF2IRD1Q9UHL9 959 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 SLC4A7Q9Y6M7 1214 aa20.35■□□□□ 0.85
DDX56-207ENST00000448192 CNTNAP5Q8WYK1 1306 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 GOLGA8AA7E2F4 631 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 GOLGA8BA8MQT2 603 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 HAS3O00219 553 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 NOP56O00567 594 aaKnown RBP20.34■□□□□ 0.85
DDX56-207ENST00000448192 PFKMP08237 780 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 RFC2P35250 354 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 NEDD9Q14511 834 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 XRRA1Q6P2D8 792 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 CYFIP1Q7L576 1253 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 CTAGE1Q96RT6 745 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 FTOQ9C0B1 505 aaKnown RBP eCLIP20.34■□□□□ 0.85
DDX56-207ENST00000448192 SNX14Q9Y5W7 946 aa20.34■□□□□ 0.85
DDX56-207ENST00000448192 SPDYE3A6NKU9 549 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 REC8O95072 547 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 HSPA4P34932 840 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 SEMA3FQ13275 785 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 WWC2Q6AWC2 1192 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 NLRX1Q86UT6 975 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 CAGE1Q8TC20 777 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 KCNB2Q92953 911 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 ZNF576Q9H609 170 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 MSRAQ9UJ68 235 aa20.33■□□□□ 0.85
DDX56-207ENST00000448192 V9GY48 417 aaPredicted RBP20.33■□□□□ 0.85
DDX56-207ENST00000448192 ACTN1P12814 892 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 NAPAP54920 295 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 SP4Q02446 784 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 APOBRQ0VD83 1088 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 Q6ZUG5 572 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 AFAP1L1Q8TED9 768 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 C16orf70Q9BSU1 422 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 PCDHA6Q9UN73 950 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 PCDHA8Q9Y5H6 950 aa20.32■□□□□ 0.84
DDX56-207ENST00000448192 EYSQ5T1H1 3165 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 H3BRB1 525 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 LGALS2P05162 132 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 FOSL2P15408 326 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 CDC27P30260 824 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 ZNF200P98182 395 aaPredicted RBP20.31■□□□□ 0.84
DDX56-207ENST00000448192 FUT2Q10981 343 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 GRIN2CQ14957 1233 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 RAB30Q15771 203 aa20.31■□□□□ 0.84
DDX56-207ENST00000448192 DHX38Q92620 1227 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms