RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 CRYGNQ8WXF5 182 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 MPHOSPH6Q99547 160 aaKnown RBP8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 PDCD2LQ9BRP1 358 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 TINF2Q9BSI4 451 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 ANO3Q9BYT9 981 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 EHMT1Q9H9B1 1298 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 MTMR6Q9Y217 621 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 MYH6P13533 1939 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 SYNGAP1Q96PV0 1343 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 CCDC194A0A1B0GVG4 234 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 POTEB3A0JP26 581 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 KIF28PB7ZC32 967 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 EIF3JO75822 258 aaKnown RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 CYP3A4P08684 503 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 MYCLP12524 364 aaPredicted RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 ELNP15502 786 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 CCND2P30279 289 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 CYP2C19P33261 490 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 DDIT3P35638 169 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 UBXN2AP68543 259 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 MRPS9P82933 396 aaKnown RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 ARHGAP4P98171 946 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 PDE4DQ08499 809 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 PTGDRQ13258 359 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 GNL2Q13823 731 aaKnown RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 STXBP2Q15833 593 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 VARS2Q5ST30 1063 aaKnown RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 MFSD14CQ5VZR4 134 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 POTEBQ6S5H4 581 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 ARMCX2Q7L311 632 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 IL31RAQ8NI17 732 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 TBCKQ8TEA7 893 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 TRIB2Q92519 343 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 RTEL1Q9NZ71 1219 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 PTCH2Q9Y6C5 1203 aa8.6□□□□□ -1.03
AC004540.1-206ENST00000448056 DOCK3Q8IZD9 2030 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 CYP3A7-CYP3A51PA0A087WV96 503 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 STAM2O75886 525 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 CYP3A7P24462 503 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 GRK4P32298 578 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 CIITAP33076 1130 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 PKP1Q13835 747 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 INF2Q27J81 1249 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 PRAMEF19Q5SWL8 479 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 FBXO46Q6PJ61 603 aaPredicted RBP8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 EEPD1Q7L9B9 569 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 CYP2W1Q8TAV3 490 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 KATNBL1Q9H079 304 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 ABHD16BQ9H3Z7 469 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 ZDHHC9Q9Y397 364 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 UBIAD1Q9Y5Z9 338 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 ZSWIM8A7E2V4 1837 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 PLXNB2O15031 1838 aa8.59□□□□□ -1.03
AC004540.1-206ENST00000448056 ZNFX1Q9P2E3 1918 aaKnown RBP8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 MGAMO43451 1857 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 FAM86B1E9PN63 330 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 MEIS1O00470 390 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 RGS20O76081 388 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 BRD1O95696 1058 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 HMGCRP04035 888 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 FAM86B2P0C5J1 330 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF865P0CJ78 1059 aaPredicted RBP8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ITGB5P18084 799 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF76P36508 570 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 TOB1P50616 345 aaPredicted RBP8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 CACNB2Q08289 660 aaPredicted RBP8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 TRIM32Q13049 653 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 RESTQ13127 1097 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ACVR2BQ13705 512 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 LETM2Q2VYF4 491 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 CEP55Q53EZ4 464 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 MAP3K21Q5TCX8 1036 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 PPP4R3AQ6IN85 833 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 TAPT1Q6NXT6 567 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 NIPA1Q7RTP0 329 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 BRAPQ7Z569 592 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 NEK8Q86SG6 692 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 FERMT3Q86UX7 667 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 TRPV1Q8NER1 839 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 INPP4AQ96PE3 977 aaPredicted RBP8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 MXRA8Q9BRK3 442 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ZSCAN16Q9H4T2 348 aaPredicted RBP8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 CDHR5Q9HBB8 845 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 VTA1Q9NP79 307 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 JADE2Q9NQC1 790 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 PDGFCQ9NRA1 345 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 NRBP1Q9UHY1 535 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 CASP8AP2Q9UKL3 1982 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF236Q9UL36 1845 aa8.58□□□□□ -1.04
AC004540.1-206ENST00000448056 IGLV3-22A0A075B6J6 115 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 RBM47A0AV96 593 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms