RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 PPFIA4O75335 1185 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 BAIAP3O94812 1187 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 GGPS1O95749 300 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 F2P00734 622 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 KCNJ6P48051 423 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 MRPS5P82675 430 aaKnown RBP17.9■□□□□ 0.46
SEC13-213ENST00000445064 TROAPQ12815 778 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 TRAF1Q13077 416 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 KCNV1Q6PIU1 500 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 TMCO2Q7Z6W1 182 aaPredicted RBP17.9■□□□□ 0.46
SEC13-213ENST00000445064 PIBF1Q8WXW3 757 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.46
SEC13-213ENST00000445064 BCAS3Q9H6U6 928 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
SEC13-213ENST00000445064 TET1Q8NFU7 2136 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 EPOPA6NHQ4 379 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 SGSM2O43147 1006 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 NBNO60934 754 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 CCND2P30279 289 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 TAP1Q03518 808 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 PTK7Q13308 1070 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 HIC1Q14526 733 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 TCTN1Q2MV58 587 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 IGDCC4Q8TDY8 1250 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 ARNTL2Q8WYA1 636 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 WNT8BQ93098 351 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 MLXIPQ9HAP2 919 aa17.89■□□□□ 0.45
SEC13-213ENST00000445064 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 TLL1O43897 1013 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 TGFB3P10600 412 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 UBA1P22314 1058 aaKnown RBP17.88■□□□□ 0.45
SEC13-213ENST00000445064 ANTXR2P58335 489 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 WDR5P61964 334 aaKnown RBP17.88■□□□□ 0.45
SEC13-213ENST00000445064 RBL2Q08999 1139 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 SART3Q15020 963 aaKnown RBP17.88■□□□□ 0.45
SEC13-213ENST00000445064 TRIM71Q2Q1W2 868 aaKnown RBP17.88■□□□□ 0.45
SEC13-213ENST00000445064 ZNF618Q5T7W0 954 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 CATIPQ7Z7H3 387 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 MAP4K1Q92918 833 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 C16orf70Q9BSU1 422 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 TSPYL2Q9H2G4 693 aaPredicted RBP17.88■□□□□ 0.45
SEC13-213ENST00000445064 MTCH2Q9Y6C9 303 aa17.88■□□□□ 0.45
SEC13-213ENST00000445064 PARNO95453 639 aaKnown RBP17.87■□□□□ 0.45
SEC13-213ENST00000445064 CXCL10P02778 98 aa17.87■□□□□ 0.45
SEC13-213ENST00000445064 HOXD8P13378 290 aaPredicted RBP17.87■□□□□ 0.45
SEC13-213ENST00000445064 DEFB103AP81534 67 aa17.87■□□□□ 0.45
SEC13-213ENST00000445064 SKIV2LQ15477 1246 aaKnown RBP17.87■□□□□ 0.45
SEC13-213ENST00000445064 KRT40Q6A162 431 aa17.87■□□□□ 0.45
SEC13-213ENST00000445064 CNKSR3Q6P9H4 555 aa17.87■□□□□ 0.45
SEC13-213ENST00000445064 SPRED2Q7Z698 418 aa17.87■□□□□ 0.45
SEC13-213ENST00000445064 ZBED2Q9BTP6 218 aa17.87■□□□□ 0.45
SEC13-213ENST00000445064 RTEL1Q9NZ71 1219 aa17.87■□□□□ 0.45
SEC13-213ENST00000445064 LCHNA4D1U4 455 aa17.86■□□□□ 0.45
SEC13-213ENST00000445064 GTPBP6O43824 516 aaPredicted RBP17.86■□□□□ 0.45
SEC13-213ENST00000445064 POU3F3P20264 500 aaPredicted RBP17.86■□□□□ 0.45
SEC13-213ENST00000445064 MRPS9P82933 396 aaKnown RBP17.86■□□□□ 0.45
SEC13-213ENST00000445064 TRAF7Q6Q0C0 670 aa17.86■□□□□ 0.45
SEC13-213ENST00000445064 MB21D2Q8IYB1 491 aaPredicted RBP17.86■□□□□ 0.45
SEC13-213ENST00000445064 ADAMTS19Q8TE59 1207 aa17.86■□□□□ 0.45
SEC13-213ENST00000445064 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
SEC13-213ENST00000445064 VCANP13611 3396 aa17.86■□□□□ 0.45
SEC13-213ENST00000445064 BAZ2BQ9UIF8 2168 aaKnown RBP17.86■□□□□ 0.45
SEC13-213ENST00000445064 CHD7Q9P2D1 2997 aa17.85■□□□□ 0.45
SEC13-213ENST00000445064 ABHD14A-ACY1A0A1B0GW23 586 aa17.85■□□□□ 0.45
SEC13-213ENST00000445064 H3BRB1 525 aa17.85■□□□□ 0.45
SEC13-213ENST00000445064 TFF2Q03403 129 aa17.85■□□□□ 0.45
SEC13-213ENST00000445064 PTPRSQ13332 1948 aa17.85■□□□□ 0.45
SEC13-213ENST00000445064 IKBKEQ14164 716 aa17.85■□□□□ 0.45
SEC13-213ENST00000445064 MYL10Q9BUA6 226 aa17.85■□□□□ 0.45
SEC13-213ENST00000445064 TUT1Q9H6E5 874 aaKnown RBP17.85■□□□□ 0.45
SEC13-213ENST00000445064 GRB10Q13322 594 aa17.84■□□□□ 0.45
SEC13-213ENST00000445064 MBTPS1Q14703 1052 aa17.84■□□□□ 0.45
SEC13-213ENST00000445064 USP17L6PQ6QN14 398 aa17.84■□□□□ 0.45
SEC13-213ENST00000445064 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
SEC13-213ENST00000445064 LY9Q9HBG7 655 aa17.84■□□□□ 0.45
SEC13-213ENST00000445064 C17orf102A2RUQ5 167 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 SPATA31C2B4DYI2 1134 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 ICAM3P32942 547 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 THPOP40225 353 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 SEMA3FQ13275 785 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 FAM117BQ6P1L5 589 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 SERINC5Q86VE9 423 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 DBF4BQ8NFT6 615 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 CTCFLQ8NI51 663 aaPredicted RBP17.83■□□□□ 0.44
SEC13-213ENST00000445064 SMARCC2Q8TAQ2 1214 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 ATP6V0A1Q93050 837 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 RRP36Q96EU6 259 aaKnown RBP17.83■□□□□ 0.44
SEC13-213ENST00000445064 INPP4AQ96PE3 977 aaPredicted RBP17.83■□□□□ 0.44
SEC13-213ENST00000445064 UHRF1Q96T88 793 aaPredicted RBP17.83■□□□□ 0.44
SEC13-213ENST00000445064 RNPEPQ9H4A4 650 aa17.83■□□□□ 0.44
SEC13-213ENST00000445064 SPTBN5Q9NRC6 3674 aaKnown RBP17.83■□□□□ 0.44
SEC13-213ENST00000445064 RSPH10B2B2RC85 870 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 NOP56O00567 594 aaKnown RBP17.82■□□□□ 0.44
SEC13-213ENST00000445064 TREHO43280 583 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 PRC1O43663 620 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 LPXNO60711 386 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 LGR5O75473 907 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms