RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 FIBPO43427 364 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 ARP10275 920 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
CCNE1-203ENST00000444983 ICAM3P32942 547 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 PDE4DQ08499 809 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 IRF5Q13568 498 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 IL17AQ16552 155 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 PLA2G4DQ86XP0 818 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 KCNG4Q8TDN1 519 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 SPATA32Q96LK8 384 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 GBP4Q96PP9 640 aa17.13■□□□□ 0.33
CCNE1-203ENST00000444983 SPATA31C2B4DYI2 1134 aa17.12■□□□□ 0.33
CCNE1-203ENST00000444983 MTMR1Q13613 665 aa17.12■□□□□ 0.33
CCNE1-203ENST00000444983 STK38Q15208 465 aa17.12■□□□□ 0.33
CCNE1-203ENST00000444983 CCL14Q16627 93 aa17.12■□□□□ 0.33
CCNE1-203ENST00000444983 FBXO2Q9UK22 296 aaPredicted RBP17.12■□□□□ 0.33
CCNE1-203ENST00000444983 HTTP42858 3142 aa17.12■□□□□ 0.33
CCNE1-203ENST00000444983 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
CCNE1-203ENST00000444983 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
CCNE1-203ENST00000444983 HOXD10P28358 340 aa17.11■□□□□ 0.33
CCNE1-203ENST00000444983 CALCRLQ16602 461 aa17.11■□□□□ 0.33
CCNE1-203ENST00000444983 AXDND1Q5T1B0 1012 aaPredicted RBP17.11■□□□□ 0.33
CCNE1-203ENST00000444983 TAPT1Q6NXT6 567 aa17.11■□□□□ 0.33
CCNE1-203ENST00000444983 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
CCNE1-203ENST00000444983 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
CCNE1-203ENST00000444983 AGO4Q9HCK5 861 aaKnown RBP17.11■□□□□ 0.33
CCNE1-203ENST00000444983 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.11■□□□□ 0.33
CCNE1-203ENST00000444983 PCDHA7Q9UN72 937 aa17.11■□□□□ 0.33
CCNE1-203ENST00000444983 SRPRBQ9Y5M8 271 aaKnown RBP17.11■□□□□ 0.33
CCNE1-203ENST00000444983 RBM47A0AV96 593 aaKnown RBP17.1■□□□□ 0.33
CCNE1-203ENST00000444983 ATP9AO75110 1047 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 TGFB3P10600 412 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 MARCKSP29966 332 aaPredicted RBP17.1■□□□□ 0.33
CCNE1-203ENST00000444983 GNPTABQ3T906 1256 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 NLRX1Q86UT6 975 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 GJA10Q969M2 543 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 ABHD16BQ9H3Z7 469 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 VTA1Q9NP79 307 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 IPO5O00410 1097 aaKnown RBP17.1■□□□□ 0.33
CCNE1-203ENST00000444983 PSMD10O75832 226 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 SP2Q02086 613 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 GRIN1Q05586 938 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 SPIRE1Q08AE8 756 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 ITGB3BPQ13352 177 aaPredicted RBP17.1■□□□□ 0.33
CCNE1-203ENST00000444983 ARHGEF6Q15052 776 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 CCDC62Q6P9F0 684 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 EEPD1Q7L9B9 569 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 SLFN12Q8IYM2 578 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 TRIB2Q92519 343 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 FERMT2Q96AC1 680 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 CDHR1Q96JP9 859 aa17.1■□□□□ 0.33
CCNE1-203ENST00000444983 KCNA2P16389 499 aa17.09■□□□□ 0.33
CCNE1-203ENST00000444983 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCNE1-203ENST00000444983 PRMT2P55345 433 aa17.09■□□□□ 0.33
CCNE1-203ENST00000444983 SEPT14Q6ZU15 432 aa17.09■□□□□ 0.33
CCNE1-203ENST00000444983 FBXO16Q8IX29 292 aaPredicted RBP17.09■□□□□ 0.33
CCNE1-203ENST00000444983 IGSF22Q8N9C0 903 aa17.09■□□□□ 0.33
CCNE1-203ENST00000444983 KRI1Q8N9T8 703 aaKnown RBP17.09■□□□□ 0.33
CCNE1-203ENST00000444983 RIT2Q99578 217 aa17.09■□□□□ 0.33
CCNE1-203ENST00000444983 SENP7Q9BQF6 1050 aa17.09■□□□□ 0.33
CCNE1-203ENST00000444983 ZNF577Q9BSK1 485 aa17.09■□□□□ 0.33
CCNE1-203ENST00000444983 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
CCNE1-203ENST00000444983 FOXN1O15353 648 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 ARIH2O95376 493 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 CYP2C19P33261 490 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 TXKP42681 527 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 ADALQ6DHV7 355 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 KCNV1Q6PIU1 500 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 DTHD1Q6ZMT9 781 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 OTOP1Q7RTM1 612 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 TRMT44Q8IYL2 757 aaKnown RBP17.08■□□□□ 0.32
CCNE1-203ENST00000444983 ZNF579Q8NAF0 562 aaKnown RBP17.08■□□□□ 0.32
CCNE1-203ENST00000444983 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 PDGFCQ9NRA1 345 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.32
CCNE1-203ENST00000444983 VAV3Q9UKW4 847 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.32
CCNE1-203ENST00000444983 ZNF865P0CJ78 1059 aaPredicted RBP17.07■□□□□ 0.32
CCNE1-203ENST00000444983 HSPA8P11142 646 aaKnown RBP17.07■□□□□ 0.32
CCNE1-203ENST00000444983 MCM4P33991 863 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 ME1P48163 572 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 ACVR2BQ13705 512 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 PDIA5Q14554 519 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 SCFD2Q8WU76 684 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 CLIC6Q96NY7 704 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 BCAS3Q9H6U6 928 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 LMBRD1Q9NUN5 540 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 NRBP1Q9UHY1 535 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 DOCK5Q9H7D0 1870 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 NFASCO94856 1347 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 CENPFP49454 3210 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 VWA3AA6NCI4 1184 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 CUTAO60888 179 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 UIMC1Q96RL1 719 aa17.07■□□□□ 0.32
CCNE1-203ENST00000444983 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
CCNE1-203ENST00000444983 UBA1P22314 1058 aaKnown RBP17.06■□□□□ 0.32
CCNE1-203ENST00000444983 LONP1P36776 959 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms