RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MCM3APO60318 1980 aa19.6■□□□□ 0.73
LIME1-202ENST00000444951 PGK1P00558 417 aa19.59■□□□□ 0.73
LIME1-202ENST00000444951 ARHGAP4P98171 946 aa19.59■□□□□ 0.73
LIME1-202ENST00000444951 RESTQ13127 1097 aa19.59■□□□□ 0.73
LIME1-202ENST00000444951 SH3RF1Q7Z6J0 888 aa19.59■□□□□ 0.73
LIME1-202ENST00000444951 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
LIME1-202ENST00000444951 PDCD2LQ9BRP1 358 aa19.59■□□□□ 0.73
LIME1-202ENST00000444951 XPNPEP3Q9NQH7 507 aa19.59■□□□□ 0.73
LIME1-202ENST00000444951 DIS3Q9Y2L1 958 aaKnown RBP19.59■□□□□ 0.73
LIME1-202ENST00000444951 NR3C2P08235 984 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 CCND2P30279 289 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 DDIT3P35638 169 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 ZNF76P36508 570 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 SREBF1P36956 1147 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 LETM2Q2VYF4 491 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 FAM173BQ6P4H8 233 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 EEPD1Q7L9B9 569 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 MPHOSPH6Q99547 160 aaKnown RBP19.58■□□□□ 0.72
LIME1-202ENST00000444951 LBHD1Q9BQE6 289 aaPredicted RBP19.58■□□□□ 0.72
LIME1-202ENST00000444951 PRDM5Q9NQX1 630 aaPredicted RBP19.58■□□□□ 0.72
LIME1-202ENST00000444951 PDLIM7Q9NR12 457 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 RTEL1Q9NZ71 1219 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 NRBP1Q9UHY1 535 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 ZDHHC9Q9Y397 364 aa19.58■□□□□ 0.72
LIME1-202ENST00000444951 TRIM43BA6NCK2 446 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 ASB14A6NK59 587 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 B4DLN1 442 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 BRD1O95696 1058 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 SNAI1O95863 264 aaPredicted RBP19.57■□□□□ 0.72
LIME1-202ENST00000444951 F13A1P00488 732 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 RARBP10826 455 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 PDIA4P13667 645 aaKnown RBP19.57■□□□□ 0.72
LIME1-202ENST00000444951 ARMCX2Q7L311 632 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 TRIM43Q96BQ3 446 aaPredicted RBP19.57■□□□□ 0.72
LIME1-202ENST00000444951 MTMR10Q9NXD2 777 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 NOL7Q9UMY1 257 aaKnown RBP19.57■□□□□ 0.72
LIME1-202ENST00000444951 PHF24Q9UPV7 400 aa19.57■□□□□ 0.72
LIME1-202ENST00000444951 FRMPD4Q14CM0 1322 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 IRX5P78411 483 aaPredicted RBP19.56■□□□□ 0.72
LIME1-202ENST00000444951 NUCB2P80303 420 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 NBR1Q14596 966 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 STXBP2Q15833 593 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 PCNX4Q63HM2 1172 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 BRAPQ7Z569 592 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 NEK8Q86SG6 692 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 IWS1Q96ST2 819 aa19.56■□□□□ 0.72
LIME1-202ENST00000444951 ZSCAN16Q9H4T2 348 aaPredicted RBP19.56■□□□□ 0.72
LIME1-202ENST00000444951 ADCY6O43306 1168 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 CCNT1O60563 726 aaKnown RBP19.55■□□□□ 0.72
LIME1-202ENST00000444951 ADAMTS4O75173 837 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 ITGB8P26012 769 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 MRPS9P82933 396 aaKnown RBP19.55■□□□□ 0.72
LIME1-202ENST00000444951 TLE2Q04725 743 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 C9orf50Q5SZB4 431 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 ZNF467Q7Z7K2 595 aaPredicted RBP19.55■□□□□ 0.72
LIME1-202ENST00000444951 VSIG10LQ86VR7 867 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 FBXO16Q8IX29 292 aaPredicted RBP19.55■□□□□ 0.72
LIME1-202ENST00000444951 BADQ92934 168 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 UIMC1Q96RL1 719 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.55■□□□□ 0.72
LIME1-202ENST00000444951 CHMP5Q9NZZ3 219 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 PRKAG2Q9UGJ0 569 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 EYSQ5T1H1 3165 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 MYH7BA7E2Y1 1941 aa19.55■□□□□ 0.72
LIME1-202ENST00000444951 SYNRGQ9UMZ2 1314 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 UNC80Q8N2C7 3258 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 MYADML2A6NDP7 307 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 WNT7AO00755 349 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 TDP2O95551 362 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 AKR1A1P14550 325 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 SHHQ15465 462 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 C1orf53Q5VUE5 145 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 MYSM1Q5VVJ2 828 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 SEPT14Q6ZU15 432 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 SLC17A8Q8NDX2 589 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 CYP2W1Q8TAV3 490 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 CIZ1Q9ULV3 898 aaPredicted RBP19.54■□□□□ 0.72
LIME1-202ENST00000444951 CNPY2Q9Y2B0 182 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 CDH23Q9H251 3354 aa19.54■□□□□ 0.72
LIME1-202ENST00000444951 SYNGAP1Q96PV0 1343 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 A0A1W2PQ45 241 aaPredicted RBP19.53■□□□□ 0.72
LIME1-202ENST00000444951 A0A1W2PQY0 241 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 EDNRBP24530 442 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 MCM7P33993 719 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 TOB1P50616 345 aaPredicted RBP19.53■□□□□ 0.72
LIME1-202ENST00000444951 USP11P51784 963 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 CEBPZQ03701 1054 aaKnown RBP19.53■□□□□ 0.72
LIME1-202ENST00000444951 ZNF174Q15697 407 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 TTC38Q5R3I4 469 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 MAMDC4Q6UXC1 1216 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 RNF180Q86T96 592 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 CRYGNQ8WXF5 182 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 PKD2L1Q9P0L9 805 aa19.53■□□□□ 0.72
LIME1-202ENST00000444951 ZHX1Q9UKY1 873 aaPredicted RBP19.53■□□□□ 0.72
LIME1-202ENST00000444951 FAM86B1E9PN63 330 aa19.52■□□□□ 0.72
LIME1-202ENST00000444951 EDIL3O43854 480 aa19.52■□□□□ 0.72
LIME1-202ENST00000444951 EIF3JO75822 258 aaKnown RBP19.52■□□□□ 0.72
LIME1-202ENST00000444951 CYP3A4P08684 503 aa19.52■□□□□ 0.72
LIME1-202ENST00000444951 FAM86B2P0C5J1 330 aa19.52■□□□□ 0.72
LIME1-202ENST00000444951 PRR16Q569H4 304 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms