RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 GNPTABQ3T906 1256 aa25.61■■□□□ 1.69
LMBR1-211ENST00000444719 NFRKBQ6P4R8 1299 aa25.61■■□□□ 1.69
LMBR1-211ENST00000444719 TMEM199Q8N511 208 aa25.61■■□□□ 1.69
LMBR1-211ENST00000444719 KAT2BQ92831 832 aa25.61■■□□□ 1.69
LMBR1-211ENST00000444719 INPP4AQ96PE3 977 aaPredicted RBP25.61■■□□□ 1.69
LMBR1-211ENST00000444719 NOC4LQ9BVI4 516 aaKnown RBP25.61■■□□□ 1.69
LMBR1-211ENST00000444719 AGXT2Q9BYV1 514 aa25.61■■□□□ 1.69
LMBR1-211ENST00000444719 CCDC196A0A1B0GTZ2 297 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 SPDYE3A6NKU9 549 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 STAM2O75886 525 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 ZNF286BP0CG31 522 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 ACRP10323 421 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 SEMA3FQ13275 785 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 PPIGQ13427 754 aaKnown RBP eCLIP25.6■■□□□ 1.691e-7■■□□□ 13.7
LMBR1-211ENST00000444719 FBXL16Q8N461 479 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 RNPC3Q96LT9 517 aaKnown RBP25.6■■□□□ 1.69
LMBR1-211ENST00000444719 LARP6Q9BRS8 491 aaKnown RBP25.6■■□□□ 1.69
LMBR1-211ENST00000444719 ZSWIM6Q9HCJ5 1215 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 PCDHA6Q9UN73 950 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 PCDHA8Q9Y5H6 950 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 CYP46A1Q9Y6A2 500 aa25.6■■□□□ 1.69
LMBR1-211ENST00000444719 TRIP12Q14669 1992 aaPredicted RBP25.6■■□□□ 1.69
LMBR1-211ENST00000444719 SPATA31C2B4DYI2 1134 aa25.59■■□□□ 1.69
LMBR1-211ENST00000444719 STXBP3O00186 592 aa25.59■■□□□ 1.69
LMBR1-211ENST00000444719 PPFIA3O75145 1194 aa25.59■■□□□ 1.69
LMBR1-211ENST00000444719 SUPT20HL2P0C7V6 817 aa25.59■■□□□ 1.69
LMBR1-211ENST00000444719 ALG1Q9BT22 464 aa25.59■■□□□ 1.69
LMBR1-211ENST00000444719 UPF3BQ9BZI7 483 aaKnown RBP25.59■■□□□ 1.69
LMBR1-211ENST00000444719 FIBPO43427 364 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 ICAM3P32942 547 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 CCT2P78371 535 aaKnown RBP25.58■■□□□ 1.69
LMBR1-211ENST00000444719 XRRA1Q6P2D8 792 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 Q7L0L9 218 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 C16orf59Q7L2K0 433 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 CYFIP1Q7L576 1253 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.58■■□□□ 1.697e-10■■■■□ 19.6
LMBR1-211ENST00000444719 RIC8AQ9NPQ8 531 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 BARHL2Q9NY43 387 aa25.58■■□□□ 1.69
LMBR1-211ENST00000444719 SCN5AQ14524 2016 aa25.58■■□□□ 1.68
LMBR1-211ENST00000444719 SMCO2A6NFE2 343 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 PDIA3P30101 505 aaKnown RBP25.57■■□□□ 1.68
LMBR1-211ENST00000444719 PSEN2P49810 448 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 ADCY7P51828 1080 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 PTPN11Q06124 597 aaPredicted RBP25.57■■□□□ 1.68
LMBR1-211ENST00000444719 TOB2Q14106 344 aaPredicted RBP25.57■■□□□ 1.68
LMBR1-211ENST00000444719 NLRX1Q86UT6 975 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 PHKBQ93100 1093 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 SCLYQ96I15 445 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 PGBD1Q96JS3 809 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 NCOA5Q9HCD5 579 aaKnown RBP25.57■■□□□ 1.68
LMBR1-211ENST00000444719 NOD1Q9Y239 953 aa25.57■■□□□ 1.68
LMBR1-211ENST00000444719 PPFIA4O75335 1185 aa25.56■■□□□ 1.68
LMBR1-211ENST00000444719 MFSD10Q14728 455 aa25.56■■□□□ 1.68
LMBR1-211ENST00000444719 PFKFB3Q16875 520 aaPredicted RBP25.56■■□□□ 1.68
LMBR1-211ENST00000444719 TMEM240Q5SV17 173 aa25.56■■□□□ 1.68
LMBR1-211ENST00000444719 GDF6Q6KF10 455 aaPredicted RBP25.56■■□□□ 1.68
LMBR1-211ENST00000444719 ZNF365Q70YC5 407 aa25.56■■□□□ 1.68
LMBR1-211ENST00000444719 TM6SF1Q9BZW5 370 aa25.56■■□□□ 1.68
LMBR1-211ENST00000444719 WNT8AQ9H1J5 351 aa25.56■■□□□ 1.68
LMBR1-211ENST00000444719 HDAC6Q9UBN7 1215 aa25.56■■□□□ 1.68
LMBR1-211ENST00000444719 hCG_1984214I3L0E3 225 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 SCG2P13521 617 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 ITGB5P18084 799 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 SP4Q02446 784 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 NEDD9Q14511 834 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 PTGISQ16647 500 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 KIAA0753Q2KHM9 967 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 PPP1R18Q6NYC8 613 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 DEFB123Q8N688 67 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 ZNF713Q8N859 430 aaPredicted RBP25.55■■□□□ 1.68
LMBR1-211ENST00000444719 KATNAL1Q9BW62 490 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 IL23AQ9NPF7 189 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 TMEM260Q9NX78 707 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 TELO2Q9Y4R8 837 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 NID2Q14112 1375 aa25.55■■□□□ 1.68
LMBR1-211ENST00000444719 NOP56O00567 594 aaKnown RBP25.54■■□□□ 1.68
LMBR1-211ENST00000444719 F2P00734 622 aa25.54■■□□□ 1.68
LMBR1-211ENST00000444719 HOXD8P13378 290 aaPredicted RBP25.54■■□□□ 1.68
LMBR1-211ENST00000444719 EVCP57679 992 aa25.54■■□□□ 1.68
LMBR1-211ENST00000444719 GPR153Q6NV75 609 aa25.54■■□□□ 1.68
LMBR1-211ENST00000444719 C7orf31Q8N865 590 aa25.54■■□□□ 1.68
LMBR1-211ENST00000444719 EHMT1Q9H9B1 1298 aa25.54■■□□□ 1.68
LMBR1-211ENST00000444719 PDRG1Q9NUG6 133 aa25.54■■□□□ 1.68
LMBR1-211ENST00000444719 PKD2L1Q9P0L9 805 aa25.54■■□□□ 1.68
LMBR1-211ENST00000444719 HAS3O00219 553 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 PRPF3O43395 683 aaKnown RBP25.53■■□□□ 1.68
LMBR1-211ENST00000444719 ATP9AO75110 1047 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 AKAP17AQ02040 695 aaKnown RBP25.53■■□□□ 1.68
LMBR1-211ENST00000444719 NTRK3Q16288 839 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 PKN1Q16512 942 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 METTL7BQ6UX53 244 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 C16orf70Q9BSU1 422 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 SLC26A6Q9BXS9 759 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 UBIAD1Q9Y5Z9 338 aa25.53■■□□□ 1.68
LMBR1-211ENST00000444719 SESTD1Q86VW0 696 aa25.52■■□□□ 1.68
LMBR1-211ENST00000444719 GPRASP2Q96D09 838 aa25.52■■□□□ 1.68
LMBR1-211ENST00000444719 SENP7Q9BQF6 1050 aa25.52■■□□□ 1.68
LMBR1-211ENST00000444719 ANO3Q9BYT9 981 aa25.52■■□□□ 1.68
LMBR1-211ENST00000444719 GTF2IRD1Q9UHL9 959 aa25.52■■□□□ 1.68
LMBR1-211ENST00000444719 ADAMTS3O15072 1205 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms