RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 PPM1EQ8WY54 764 aa27.33■■□□□ 1.97
TMEM238-201ENST00000444469 LSG1Q9H089 658 aaKnown RBP27.33■■□□□ 1.97
TMEM238-201ENST00000444469 HDAC6Q9UBN7 1215 aa27.33■■□□□ 1.97
TMEM238-201ENST00000444469 YBX2Q9Y2T7 364 aaKnown RBP27.33■■□□□ 1.97
TMEM238-201ENST00000444469 KIF28PB7ZC32 967 aa27.32■■□□□ 1.96
TMEM238-201ENST00000444469 NOP56O00567 594 aaKnown RBP27.32■■□□□ 1.96
TMEM238-201ENST00000444469 SLC27A2O14975 620 aa27.32■■□□□ 1.96
TMEM238-201ENST00000444469 SELPP16109 830 aa27.32■■□□□ 1.96
TMEM238-201ENST00000444469 UBA1P22314 1058 aaKnown RBP27.32■■□□□ 1.96
TMEM238-201ENST00000444469 SMARCA1P28370 1054 aa27.32■■□□□ 1.96
TMEM238-201ENST00000444469 RNF20Q5VTR2 975 aa27.32■■□□□ 1.96
TMEM238-201ENST00000444469 MYSM1Q5VVJ2 828 aa27.32■■□□□ 1.96
TMEM238-201ENST00000444469 LRRC8DQ7L1W4 858 aa27.32■■□□□ 1.96
TMEM238-201ENST00000444469 COL25A1Q9BXS0 654 aaPredicted RBP27.32■■□□□ 1.96
TMEM238-201ENST00000444469 RGS20O76081 388 aa27.31■■□□□ 1.96
TMEM238-201ENST00000444469 BAIAP3O94812 1187 aa27.31■■□□□ 1.96
TMEM238-201ENST00000444469 SYNE3Q6ZMZ3 975 aa27.31■■□□□ 1.96
TMEM238-201ENST00000444469 PHOSPHO2Q8TCD6 241 aa27.31■■□□□ 1.96
TMEM238-201ENST00000444469 ZFP91Q96JP5 570 aaPredicted RBP27.31■■□□□ 1.96
TMEM238-201ENST00000444469 SLC12A7Q9Y666 1083 aa27.31■■□□□ 1.96
TMEM238-201ENST00000444469 TANC1Q9C0D5 1861 aa27.3■■□□□ 1.96
TMEM238-201ENST00000444469 SH2B2O14492 632 aaPredicted RBP27.3■■□□□ 1.96
TMEM238-201ENST00000444469 HSDL1Q3SXM5 330 aa27.3■■□□□ 1.96
TMEM238-201ENST00000444469 CREB3L3Q68CJ9 461 aa27.3■■□□□ 1.96
TMEM238-201ENST00000444469 CENPQQ7L2Z9 268 aaPredicted RBP27.3■■□□□ 1.96
TMEM238-201ENST00000444469 PTK7Q13308 1070 aa27.29■■□□□ 1.96
TMEM238-201ENST00000444469 NEDD9Q14511 834 aa27.29■■□□□ 1.96
TMEM238-201ENST00000444469 FIBPO43427 364 aa27.28■■□□□ 1.96
TMEM238-201ENST00000444469 LIFRP42702 1097 aa27.28■■□□□ 1.96
TMEM238-201ENST00000444469 SYMPKQ92797 1274 aaKnown RBP27.28■■□□□ 1.96
TMEM238-201ENST00000444469 VWCEQ96DN2 955 aa27.28■■□□□ 1.96
TMEM238-201ENST00000444469 HAS3O00219 553 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 CKBP12277 381 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 MYOGP15173 224 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 SP2Q02086 613 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 BMP2KLQ5H9B9 411 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 XRRA1Q6P2D8 792 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 NLRX1Q86UT6 975 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 RTEL1Q9NZ71 1219 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 SCN5AQ14524 2016 aa27.27■■□□□ 1.96
TMEM238-201ENST00000444469 FRMPD4Q14CM0 1322 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 PLEKHA8P1O95397 391 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 CA3P07451 260 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 HOXD8P13378 290 aaPredicted RBP27.26■■□□□ 1.95
TMEM238-201ENST00000444469 RXRAP19793 462 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 RBL2Q08999 1139 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 NECTIN1Q15223 517 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 CNKSR3Q6P9H4 555 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 USP17L6PQ6QN14 398 aa27.26■■□□□ 1.95
TMEM238-201ENST00000444469 INPP4AQ96PE3 977 aaPredicted RBP27.26■■□□□ 1.95
TMEM238-201ENST00000444469 BAZ2BQ9UIF8 2168 aaKnown RBP27.26■■□□□ 1.95
TMEM238-201ENST00000444469 C17orf102A2RUQ5 167 aa27.25■■□□□ 1.95
TMEM238-201ENST00000444469 ICAM3P32942 547 aa27.25■■□□□ 1.95
TMEM238-201ENST00000444469 HERC6Q8IVU3 1022 aa27.25■■□□□ 1.95
TMEM238-201ENST00000444469 SRBD1Q8N5C6 995 aaKnown RBP27.25■■□□□ 1.95
TMEM238-201ENST00000444469 DHX38Q92620 1227 aaKnown RBP27.25■■□□□ 1.95
TMEM238-201ENST00000444469 GPKOWQ92917 476 aaPredicted RBP eCLIP27.25■■□□□ 1.95
TMEM238-201ENST00000444469 ZBED2Q9BTP6 218 aa27.25■■□□□ 1.95
TMEM238-201ENST00000444469 TSPYL2Q9H2G4 693 aaPredicted RBP27.25■■□□□ 1.95
TMEM238-201ENST00000444469 PSTPIP2Q9H939 334 aa27.25■■□□□ 1.95
TMEM238-201ENST00000444469 MYH7BA7E2Y1 1941 aa27.25■■□□□ 1.95
TMEM238-201ENST00000444469 GBF1Q92538 1859 aa27.25■■□□□ 1.95
TMEM238-201ENST00000444469 H3BRB1 525 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 PIK3CDO00329 1044 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 MRPS9P82933 396 aaKnown RBP27.24■■□□□ 1.95
TMEM238-201ENST00000444469 CCDC85BQ15834 202 aaPredicted RBP27.24■■□□□ 1.95
TMEM238-201ENST00000444469 PCNX4Q63HM2 1172 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 METTL7BQ6UX53 244 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 CYFIP1Q7L576 1253 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 MICU3Q86XE3 530 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 CMTR1Q8N1G2 835 aaKnown RBP27.24■■□□□ 1.95
TMEM238-201ENST00000444469 USP38Q8NB14 1042 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 USP26Q9BXU7 913 aa27.24■■□□□ 1.95
TMEM238-201ENST00000444469 TUT1Q9H6E5 874 aaKnown RBP27.24■■□□□ 1.95
TMEM238-201ENST00000444469 ZNF215Q9UL58 517 aaPredicted RBP27.24■■□□□ 1.95
TMEM238-201ENST00000444469 SPATA31C2B4DYI2 1134 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 TLL1O43897 1013 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 EFCAB14O75071 495 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 LGALS2P05162 132 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 RAB11FIP4Q86YS3 637 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 MICALL1Q8N3F8 863 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 CCDC82Q8N4S0 544 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 GIMAP8Q8ND71 665 aaPredicted RBP27.23■■□□□ 1.95
TMEM238-201ENST00000444469 CTAGE1Q96RT6 745 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 C16orf70Q9BSU1 422 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 LRRC2Q9BYS8 371 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 EHMT1Q9H9B1 1298 aa27.23■■□□□ 1.95
TMEM238-201ENST00000444469 SPDYE3A6NKU9 549 aa27.22■■□□□ 1.95
TMEM238-201ENST00000444469 GTPBP6O43824 516 aaPredicted RBP27.22■■□□□ 1.95
TMEM238-201ENST00000444469 GNAT1P11488 350 aa27.22■■□□□ 1.95
TMEM238-201ENST00000444469 ADGRE1Q14246 886 aa27.22■■□□□ 1.95
TMEM238-201ENST00000444469 FANCBQ8NB91 859 aa27.22■■□□□ 1.95
TMEM238-201ENST00000444469 ATP6V0A1Q93050 837 aa27.22■■□□□ 1.95
TMEM238-201ENST00000444469 CDHR1Q96JP9 859 aa27.22■■□□□ 1.95
TMEM238-201ENST00000444469 NEK1Q96PY6 1258 aa27.22■■□□□ 1.95
TMEM238-201ENST00000444469 EMSYQ7Z589 1322 aa27.21■■□□□ 1.95
TMEM238-201ENST00000444469 MEIS2O14770 477 aa27.21■■□□□ 1.95
TMEM238-201ENST00000444469 THPOP40225 353 aa27.21■■□□□ 1.95
TMEM238-201ENST00000444469 WDR5P61964 334 aaKnown RBP27.21■■□□□ 1.95
TMEM238-201ENST00000444469 ZNF200P98182 395 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms