RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 COL20A1Q9P218 1284 aa15.24■□□□□ 0.03
SF1-210ENST00000443908 FBXO2Q9UK22 296 aaPredicted RBP15.24■□□□□ 0.03
SF1-210ENST00000443908 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
SF1-210ENST00000443908 PCDHA7Q9UN72 937 aa15.24■□□□□ 0.03
SF1-210ENST00000443908 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
SF1-210ENST00000443908 RANBP2P49792 3224 aaKnown RBP15.23■□□□□ 0.03
SF1-210ENST00000443908 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 XRCC5P13010 732 aaKnown RBP15.23■□□□□ 0.03
SF1-210ENST00000443908 ERCC3P19447 782 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 BMP8BP34820 402 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 RGS2P41220 211 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 CACNB2Q08289 660 aaPredicted RBP15.23■□□□□ 0.03
SF1-210ENST00000443908 KLHL40Q2TBA0 621 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 Q4G0T1 1027 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
SF1-210ENST00000443908 PLEKHH3Q7Z736 793 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 NCAPG2Q86XI2 1143 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 DNERQ8NFT8 737 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 GDF15Q99988 308 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 SZT2Q5T011 3432 aa15.23■□□□□ 0.03
SF1-210ENST00000443908 MYH7BA7E2Y1 1941 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 TBX3O15119 743 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 GADD45BO75293 160 aaPredicted RBP15.22■□□□□ 0.03
SF1-210ENST00000443908 TDP2O95551 362 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 OR52Z1P0C646 297 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 NIPA1Q7RTP0 329 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 GPR142Q7Z601 462 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 ABRAQ8N0Z2 381 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 UBE2OQ9C0C9 1292 aaKnown RBP15.22■□□□□ 0.03
SF1-210ENST00000443908 PORCNQ9H237 461 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 PXMP2Q9NR77 195 aa15.22■□□□□ 0.03
SF1-210ENST00000443908 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
SF1-210ENST00000443908 LOC102724159A0A0B4J2E5 919 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 FAM237AA0A1B0GTK4 181 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 SLC37A4O43826 429 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 MARCKSP29966 332 aaPredicted RBP15.21■□□□□ 0.03
SF1-210ENST00000443908 CCND3P30281 292 aaPredicted RBP15.21■□□□□ 0.03
SF1-210ENST00000443908 MAGEA10P43363 369 aaPredicted RBP15.21■□□□□ 0.03
SF1-210ENST00000443908 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
SF1-210ENST00000443908 PWP2Q15269 919 aaKnown RBP15.21■□□□□ 0.03
SF1-210ENST00000443908 CCL14Q16627 93 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 ANKRD35Q8N283 1001 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 DEFB123Q8N688 67 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 NSUN6Q8TEA1 469 aaKnown RBP15.21■□□□□ 0.03
SF1-210ENST00000443908 LENG9Q96B70 501 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 MTMR9Q96QG7 549 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 TAAR1Q96RJ0 339 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 RMDN3Q96TC7 470 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 TMEM60Q9H2L4 133 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 KCNMB3Q9NPA1 279 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 ZNF236Q9UL36 1845 aa15.21■□□□□ 0.03
SF1-210ENST00000443908 DNAJC25-GNG10A0A024R161 153 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 IGLV3-22A0A075B6J6 115 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 STRNO43815 780 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 TRAK2O60296 914 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 STAM2O75886 525 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 CMA1P23946 247 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 CNGA1P29973 690 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 LONP1P36776 959 aaKnown RBP15.2■□□□□ 0.02
SF1-210ENST00000443908 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
SF1-210ENST00000443908 KCTD2Q14681 263 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 PGM5Q15124 567 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 CALCRLQ16602 461 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 MAP3K21Q5TCX8 1036 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 MFSD14CQ5VZR4 134 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 FAM133AQ8N9E0 248 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 GPT2Q8TD30 523 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
SF1-210ENST00000443908 IWS1Q96ST2 819 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 MMP19Q99542 508 aa15.2■□□□□ 0.02
SF1-210ENST00000443908 ADD3Q9UEY8 706 aaKnown RBP15.2■□□□□ 0.02
SF1-210ENST00000443908 DDX49Q9Y6V7 483 aaKnown RBP15.2■□□□□ 0.02
SF1-210ENST00000443908 LCTP09848 1927 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 FAM86B1E9PN63 330 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 FAM86B2P0C5J1 330 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 FCER1AP12319 257 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 ZNF76P36508 570 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
SF1-210ENST00000443908 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 MORN1Q5T089 497 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 ARHGEF16Q5VV41 709 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 RESP18Q5W5W9 173 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 DTHD1Q6ZMT9 781 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 SLFN12Q8IYM2 578 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 TDHQ8IZJ6 230 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 AK8Q96MA6 479 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 MXRA8Q9BRK3 442 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
SF1-210ENST00000443908 UBIAD1Q9Y5Z9 338 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 MRVI1Q9Y6F6 885 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 IVNS1ABPQ9Y6Y0 642 aa15.19■□□□□ 0.02
SF1-210ENST00000443908 B4DLN1 442 aa15.18■□□□□ 0.02
SF1-210ENST00000443908 MEIS1O00470 390 aa15.18■□□□□ 0.02
SF1-210ENST00000443908 EIF2AK2P19525 551 aaKnown RBP15.18■□□□□ 0.02
SF1-210ENST00000443908 EDNRBP24530 442 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms