RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 CCSER1Q9C0I3 900 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 ZC3H4Q9UPT8 1303 aaKnown RBP14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 IRS2Q9Y4H2 1338 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 E9PMD0 336 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 TACC1O75410 805 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 STAT3P40763 770 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 TCP10Q12799 353 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 PDCLQ13371 301 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 KCNB1Q14721 858 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 DHTKD1Q96HY7 919 aaPredicted RBP14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 PNMA5Q96PV4 448 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 IKZF4Q9H2S9 585 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 ACBD3Q9H3P7 528 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 NFU1Q9UMS0 254 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 BCS1LQ9Y276 419 aa14.54□□□□□ -0.08
SLC48A1-201ENST00000442218 PALM3A6NDB9 673 aaPredicted RBP14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 MPHOSPH10O00566 681 aaKnown RBP14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 BACH1O14867 736 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 ACTN1P12814 892 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 RAPGEF1Q13905 1077 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 MSL1Q68DK7 614 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 KCTD1Q719H9 257 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 DDX4Q9NQI0 724 aaKnown RBP14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 MEIS1O00470 390 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 CARSP49589 748 aaKnown RBP14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 EHHADHQ08426 723 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 PACS2Q86VP3 889 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 ZFPM1Q8IX07 1006 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 LARP4BQ92615 738 aaKnown RBP14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 ADAMTS1Q9UHI8 967 aa14.53□□□□□ -0.08
SLC48A1-201ENST00000442218 BICDL2A1A5D9 508 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 MAP9Q49MG5 647 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 FAM76AQ8TAV0 307 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 PYM1Q9BRP8 204 aaKnown RBP14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 SH2D4AQ9H788 454 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 GLI1P08151 1106 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 AKR1B1P15121 316 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 GNGT1P63211 74 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 GUCY2DQ02846 1103 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 CKAP4Q07065 602 aaKnown RBP14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 DHX37Q8IY37 1157 aaKnown RBP14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 MICALL1Q8N3F8 863 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 FAM133AQ8N9E0 248 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 TBC1D5Q92609 795 aa14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 LSM14BQ9BX40 385 aaKnown RBP14.52□□□□□ -0.08
SLC48A1-201ENST00000442218 USP17L15C9J2P7 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L13C9JLJ4 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L11C9JVI0 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L18D6R9N7 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L22D6RA61 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L17D6RBQ6 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L19D6RCP7 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L20D6RJB6 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L24Q0WX57 530 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 SBK1Q52WX2 424 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 CNNM4Q6P4Q7 775 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 USP17L6PQ6QN14 398 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 DPP8Q6V1X1 898 aaPredicted RBP14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 PSD3Q9NYI0 1048 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 SIK3Q9Y2K2 1263 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.09
SLC48A1-201ENST00000442218 PALMO75781 387 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 TUBB2AQ13885 445 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 C8orf74Q6P047 294 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 BCAS4Q8TDM0 211 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 KRT12Q99456 494 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 TUBB2BQ9BVA1 445 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 ZMYND12Q9H0C1 365 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 EPB41L5Q9HCM4 733 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 MED4Q9NPJ6 270 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 BAG3O95817 575 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 NFIAQ12857 509 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 SPTY2D1Q68D10 685 aaPredicted RBP14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 TRMT1LQ7Z2T5 733 aaKnown RBP14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 DDX42Q86XP3 938 aaKnown RBP eCLIP14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 WDR66Q8TBY9 1149 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 RBM17Q96I25 401 aaKnown RBP14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.51□□□□□ -0.094e-6■■■■■ 34.2
SLC48A1-201ENST00000442218 CENPFP49454 3210 aa14.51□□□□□ -0.09
SLC48A1-201ENST00000442218 EDIL3O43854 480 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 RHBDL3P58872 404 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 KCNMA1Q12791 1236 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 HAUS3Q68CZ6 603 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 KRT25Q7Z3Z0 450 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 ZNF804AQ7Z570 1209 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 OR2W6PQ8NHA6 318 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 CCDC43Q96MW1 224 aaKnown RBP14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 RUFY1Q96T51 708 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 TLR10Q9BXR5 811 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 PLAGL2Q9UPG8 496 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 PCP11498 1178 aaKnown RBP14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 KLRC1P26715 233 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 HPDP32754 393 aaPredicted RBP14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 GNAQP50148 359 aa14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 ADAT2Q7Z6V5 191 aaKnown RBP14.5□□□□□ -0.09
SLC48A1-201ENST00000442218 CERS5Q8N5B7 392 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms