RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SKIV2LQ15477 1246 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 GJC2Q5T442 439 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 LBX2Q6XYB7 198 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 SGMS1Q86VZ5 419 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 ENAHQ8N8S7 591 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 FANCBQ8NB91 859 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 TINF2Q9BSI4 451 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 GOLGA6L6A8MZA4 724 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 PGK1P00558 417 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 H2AFXP16104 143 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 ADCY7P51828 1080 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 SLC39A14Q15043 492 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 APTXQ7Z2E3 356 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 MRPS27Q92552 414 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 TRPC6Q9Y210 931 aa8.31□□□□□ -1.08
CDC42BPA-208ENST00000442054 COL4A5P29400 1685 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 IKBKBO14920 756 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 SARSP49591 514 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 RESP18Q5W5W9 173 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 RIOX2Q8IUF8 465 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 CDK5RAP3Q96JB5 506 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 SDF4Q9BRK5 362 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 ABHD16BQ9H3Z7 469 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 ABCB11O95342 1321 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 A0A1B0GVL5 298 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 SMCO2A6NFE2 343 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 SSBP05455 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 TOB1P50616 345 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 IGBP1P78318 339 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 GUCY1B3Q02153 619 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 PDE4CQ08493 712 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 TMEM132BQ14DG7 1078 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 BRAPQ7Z569 592 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 ADGRF4Q8IZF3 695 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 TRIM5Q9C035 493 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 LY9Q9HBG7 655 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 BTBD7Q9P203 1132 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 ZBTB5O15062 677 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 PPP6R2O75170 966 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 DDAH1O94760 285 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 PDHBP11177 359 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 TNNT1P13805 278 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 CCND2P30279 289 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 NLRP12P59046 1061 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 GABPAQ06546 454 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 PPP4R3AQ6IN85 833 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 METTL16Q86W50 562 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 KIF18AQ8NI77 898 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 SCFD2Q8WU76 684 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 C16orf45Q96MC5 204 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 TXNRD2Q9NNW7 524 aa8.3□□□□□ -1.08
CDC42BPA-208ENST00000442054 BAZ2AQ9UIF9 1905 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 MYH1P12882 1939 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 GJB1P08034 283 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 ZNF18P17022 549 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 CCL14Q16627 93 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 AOPEPQ8N6M6 819 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 C7orf31Q8N865 590 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 GPKOWQ92917 476 aaPredicted RBP eCLIP8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 AIFM3Q96NN9 605 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 ANO10Q9NW15 660 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 STK36Q9NRP7 1315 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 PNMA6FA0A0J9YX94 578 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 CHMP2AO43633 222 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 PFKFB1P16118 471 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 SYN1P17600 705 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 ADCYAP1R1P41586 468 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 RPS6P62753 249 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 GPAT2Q6NUI2 795 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 REXO1L1PQ8IX06 675 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 SHCBP1Q8NEM2 672 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 GMCL1Q96IK5 515 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 ZNF396Q96N95 335 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 PPP1R12CQ9BZL4 782 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 ARFGEF1Q9Y6D6 1849 aa8.29□□□□□ -1.08
CDC42BPA-208ENST00000442054 ZNF202O95125 648 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 SLFN14P0C7P3 912 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 ACVR2BQ13705 512 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 SPOUT1Q5T280 376 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 KCNG4Q8TDN1 519 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 PPP1R13BQ96KQ4 1090 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 WDR11Q9BZH6 1224 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 SCN4AP35499 1836 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 ICAM1P05362 532 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 BCRP11274 1271 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 CNTN2Q02246 1040 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 ARMCX2Q7L311 632 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 FBXO16Q8IX29 292 aaPredicted RBP8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 PDCL2Q8N4E4 241 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 GMCL1P1Q8NEA9 526 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 CDHR1Q96JP9 859 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 XPO4Q9C0E2 1151 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms