RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PNMA6FA0A0J9YX94 578 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 PAFAH1B1P43034 410 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 GFPT1Q06210 699 aaPredicted RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 TDRD12Q587J7 1177 aaKnown RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 PRR5LQ6MZQ0 368 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 SRLQ86TD4 932 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 GLIS3Q8NEA6 775 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 AENQ8WTP8 325 aaKnown RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 LRRC1Q9BTT6 524 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 NUCKS1Q9H1E3 243 aaKnown RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 GOLGA6BA6NDN3 693 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 TRAF5O00463 557 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 COASYQ13057 564 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 PICALMQ13492 652 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 ASTE1Q2TB18 679 aaPredicted RBP18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 CCDC40Q4G0X9 1142 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 NOX5Q96PH1 765 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 PSMB7Q99436 277 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 MYO1CO00159 1063 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 CXCR5P32302 372 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 KCNMA1Q12791 1236 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 VPS72Q15906 364 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 UBE2SQ16763 222 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 SLC9C1Q4G0N8 1177 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 GPIHBP1Q8IV16 184 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 RNF10Q8N5U6 811 aaKnown RBP18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 CCDC155Q8N6L0 562 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 CUL5Q93034 780 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 NT5C3AQ9H0P0 336 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 DMGDHQ9UI17 866 aaKnown RBP18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 PCDHA12Q9UN75 941 aa18.24■□□□□ 0.51
SEMA3B-207ENST00000441915 TTLL1O95922 423 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 AKR1B1P15121 316 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 NAP1L1P55209 391 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 RASSF7Q02833 373 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 FAM26FQ5R3K3 315 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 ADGRF4Q8IZF3 695 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 DNAJC19Q96DA6 116 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 HINFPQ9BQA5 517 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 PANK4Q9NVE7 773 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 CEP72Q9P209 647 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 AGPSO00116 658 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 MRPL12P52815 198 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 GABPAQ06546 454 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 ECM1Q16610 540 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 ZCWPW2Q504Y3 356 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 HGSNATQ68CP4 663 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 LRRC31Q6UY01 552 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 HDAC7Q8WUI4 952 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 HAS1Q92839 578 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 NLRC4Q9NPP4 1024 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 LUC7LQ9NQ29 371 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 SALL4Q9UJQ4 1053 aa18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 RRP15Q9Y3B9 282 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-207ENST00000441915 CLK2P49760 499 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 EZH2Q15910 746 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 TSKSQ9UJT2 592 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 DAGLAQ9Y4D2 1042 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 KDM3AQ9Y4C1 1321 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 SSBP05455 408 aaKnown RBP eCLIP18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 GCFC2P16383 781 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 CRY2Q49AN0 593 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.512e-8■■■□□ 18.2
SEMA3B-207ENST00000441915 SYN2Q92777 582 aaPredicted RBP18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 NGLY1Q96IV0 654 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 LCMT1Q9UIC8 334 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 SLC1A4P43007 532 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 FAM83BQ5T0W9 1011 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 SFMBT2Q5VUG0 894 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 FAM196AQ6ZSG2 479 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 CLEC10AQ8IUN9 316 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 MTMR8Q96EF0 704 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 CEP63Q96MT8 703 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 C8orf37Q96NL8 207 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 STIM2Q9P246 746 aa18.22■□□□□ 0.51
SEMA3B-207ENST00000441915 IGKV6D-41A0A0C4DH26 115 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 RBAK-RBAKDNI3L0D1 243 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 BUB1O43683 1085 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 GNA14O95837 355 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 SERPING1P05155 500 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 KLHDC7AQ5VTJ3 777 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 TEX2Q8IWB9 1127 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 CCDC65Q8IXS2 484 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 FAM76AQ8TAV0 307 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 TBC1D16Q8TBP0 767 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 TLR10Q9BXR5 811 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 POLLQ9UGP5 575 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 NHSQ6T4R5 1651 aa18.21■□□□□ 0.51
SEMA3B-207ENST00000441915 GOLGA6CA6NDK9 693 aa18.21■□□□□ 0.5
SEMA3B-207ENST00000441915 NCK2O43639 380 aa18.21■□□□□ 0.5
SEMA3B-207ENST00000441915 GOLGA6DP0CG33 693 aa18.21■□□□□ 0.5
SEMA3B-207ENST00000441915 EPHB4P54760 987 aa18.21■□□□□ 0.5
SEMA3B-207ENST00000441915 SLC7A5Q01650 507 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms