RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 COPS5Q92905 334 aa16.92■□□□□ 0.3
PLOD3-205ENST00000440925 AGO4Q9HCK5 861 aaKnown RBP16.92■□□□□ 0.3
PLOD3-205ENST00000440925 KCNMB3Q9NPA1 279 aa16.92■□□□□ 0.3
PLOD3-205ENST00000440925 KCNH7Q9NS40 1196 aa16.92■□□□□ 0.3
PLOD3-205ENST00000440925 SLC5A4Q9NY91 659 aa16.92■□□□□ 0.3
PLOD3-205ENST00000440925 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
PLOD3-205ENST00000440925 CYBAP13498 195 aa16.91■□□□□ 0.3
PLOD3-205ENST00000440925 KCNA2P16389 499 aa16.91■□□□□ 0.3
PLOD3-205ENST00000440925 CCND3P30281 292 aaPredicted RBP16.91■□□□□ 0.3
PLOD3-205ENST00000440925 MCM7P33993 719 aa16.91■□□□□ 0.3
PLOD3-205ENST00000440925 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
PLOD3-205ENST00000440925 LY6KQ17RY6 165 aa16.91■□□□□ 0.3
PLOD3-205ENST00000440925 GJC2Q5T442 439 aaPredicted RBP16.91■□□□□ 0.3
PLOD3-205ENST00000440925 ANO1Q5XXA6 986 aa16.91■□□□□ 0.3
PLOD3-205ENST00000440925 CTU1Q7Z7A3 348 aaKnown RBP16.91■□□□□ 0.3
PLOD3-205ENST00000440925 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
PLOD3-205ENST00000440925 SH3TC2Q8TF17 1288 aa16.91■□□□□ 0.3
PLOD3-205ENST00000440925 DDX25Q9UHL0 483 aaKnown RBP16.91■□□□□ 0.3
PLOD3-205ENST00000440925 HTTP42858 3142 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 STAM2O75886 525 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 SMPD1P17405 629 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 ZNF76P36508 570 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 NASPP49321 788 aaPredicted RBP16.9■□□□□ 0.3
PLOD3-205ENST00000440925 CEBPZQ03701 1054 aaKnown RBP16.9■□□□□ 0.3
PLOD3-205ENST00000440925 GRIN1Q05586 938 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 PTGDRQ13258 359 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 ARHGEF6Q15052 776 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 CCDC144BQ3MJ40 725 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 B3GNT9Q6UX72 402 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 LINC00301Q8NCQ3 95 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 RAET1EQ8TD07 263 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 SLC5A5Q92911 643 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 GPRASP2Q96D09 838 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 ABHD16BQ9H3Z7 469 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 EHMT1Q9H9B1 1298 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 VTA1Q9NP79 307 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 RCOR1Q9UKL0 485 aa16.9■□□□□ 0.3
PLOD3-205ENST00000440925 GRK4P32298 578 aa16.89■□□□□ 0.29
PLOD3-205ENST00000440925 SLC39A14Q15043 492 aa16.89■□□□□ 0.29
PLOD3-205ENST00000440925 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
PLOD3-205ENST00000440925 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
PLOD3-205ENST00000440925 CNPY2Q9Y2B0 182 aa16.89■□□□□ 0.29
PLOD3-205ENST00000440925 CTAGE5O15320 804 aa16.88■□□□□ 0.29
PLOD3-205ENST00000440925 PSMD10O75832 226 aa16.88■□□□□ 0.29
PLOD3-205ENST00000440925 GCFC2P16383 781 aaKnown RBP16.88■□□□□ 0.29
PLOD3-205ENST00000440925 ATP2C1P98194 919 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-205ENST00000440925 SPIRE1Q08AE8 756 aa16.88■□□□□ 0.29
PLOD3-205ENST00000440925 IQSEC1Q6DN90 963 aa16.88■□□□□ 0.29
PLOD3-205ENST00000440925 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
PLOD3-205ENST00000440925 LENG1Q96BZ8 264 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-205ENST00000440925 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
PLOD3-205ENST00000440925 PKD2L1Q9P0L9 805 aa16.88■□□□□ 0.29
PLOD3-205ENST00000440925 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
PLOD3-205ENST00000440925 MAFGO15525 162 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 SORBS3O60504 671 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 CCNE2O96020 404 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 HMGCRP04035 888 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 INHAP05111 366 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
PLOD3-205ENST00000440925 MTMR1Q13613 665 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 MTFR1Q15390 333 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 MFSD14CQ5VZR4 134 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 LHX8Q68G74 356 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 CLEC17AQ6ZS10 378 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 NLRX1Q86UT6 975 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 SLAIN1Q8ND83 568 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 NRBP1Q9UHY1 535 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
PLOD3-205ENST00000440925 ZHX1Q9UKY1 873 aaPredicted RBP16.87■□□□□ 0.29
PLOD3-205ENST00000440925 KIAA1217Q5T5P2 1943 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 B4DLN1 442 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 IPO5O00410 1097 aaKnown RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 EML1O00423 815 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 FIBPO43427 364 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 TGFB3P10600 412 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 UBA1P22314 1058 aaKnown RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 ARHGAP1Q07960 439 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 DUSP28Q4G0W2 176 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 AXDND1Q5T1B0 1012 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 CLIC6Q96NY7 704 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 SENP7Q9BQF6 1050 aa16.86■□□□□ 0.29
PLOD3-205ENST00000440925 FBXO2Q9UK22 296 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 MORC2Q9Y6X9 1032 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-205ENST00000440925 GSTTP1A0A1W2PQM5 241 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 TBX3O15119 743 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 NEMFO60524 1076 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 TXKP42681 527 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 ORC2Q13416 577 aaPredicted RBP16.85■□□□□ 0.29
PLOD3-205ENST00000440925 CALCRLQ16602 461 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 CELF3Q5SZQ8 465 aaKnown RBP16.85■□□□□ 0.29
PLOD3-205ENST00000440925 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms