RNA–Protein interactions for RNA: ENST00000440759.5

TRO-213, Transcript of trophinin, human

TSL 4

Gene TRO, Length 672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-213	ENST00000440759	CELF3	Q5SZQ8	465 aa	Known RBP	13.1	□□□□□ -0.31
TRO-213	ENST00000440759	CASC1	Q6TDU7	716 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	DEFB128	Q7Z7B8	93 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
TRO-213	ENST00000440759	USP38	Q8NB14	1042 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	CTCFL	Q8NI51	663 aa	Predicted RBP	13.1	□□□□□ -0.31
TRO-213	ENST00000440759	WNT8B	Q93098	351 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	TMEM87B	Q96K49	555 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	INPP4A	Q96PE3	977 aa	Predicted RBP	13.1	□□□□□ -0.31
TRO-213	ENST00000440759	NKX2-4	Q9H2Z4	354 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	GTF2IRD1	Q9UHL9	959 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	MICAL3	Q7RTP6	2002 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	hCG_1642624	A0A1W2PR95	340 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	DLL1	O00548	723 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	MEIS2	O14770	477 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	PFKM	P08237	780 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	MYOG	P15173	224 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	CAST	P20810	708 aa	Known RBP	13.09	□□□□□ -0.31
TRO-213	ENST00000440759	LIFR	P42702	1097 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	RABGGTB	P53611	331 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	RBL2	Q08999	1139 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	LAMC2	Q13753	1193 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	MFSD10	Q14728	455 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	TCTN1	Q2MV58	587 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	TRAF7	Q6Q0C0	670 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	USP17L6P	Q6QN14	398 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	DHX37	Q8IY37	1157 aa	Known RBP	13.09	□□□□□ -0.31
TRO-213	ENST00000440759	RASEF	Q8IZ41	740 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	HDAC6	Q9UBN7	1215 aa		13.09	□□□□□ -0.31
TRO-213	ENST00000440759	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.08	□□□□□ -0.32
TRO-213	ENST00000440759	SMARCA1	P28370	1054 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	KIF5B	P33176	963 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	RFC2	P35250	354 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	ZNF200	P98182	395 aa	Predicted RBP	13.08	□□□□□ -0.32
TRO-213	ENST00000440759	TRAF1	Q13077	416 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	ADGRE1	Q14246	886 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	RAB30	Q15771	203 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	KIAA0753	Q2KHM9	967 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	TRIM71	Q2Q1W2	868 aa	Known RBP	13.08	□□□□□ -0.32
TRO-213	ENST00000440759	TMTC3	Q6ZXV5	915 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	SGMS1	Q86VZ5	419 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	RPUSD2	Q8IZ73	545 aa	Known RBP	13.08	□□□□□ -0.32
TRO-213	ENST00000440759	RRP36	Q96EU6	259 aa	Known RBP	13.08	□□□□□ -0.32
TRO-213	ENST00000440759	TCEANC2	Q96MN5	208 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	C16orf70	Q9BSU1	422 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	ALG1	Q9BT22	464 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	MTIF3	Q9H2K0	278 aa	Known RBP	13.08	□□□□□ -0.32
TRO-213	ENST00000440759	PRDM12	Q9H4Q4	367 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	SLC4A7	Q9Y6M7	1214 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	CNTNAP5	Q8WYK1	1306 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	NCOR1	O75376	2440 aa		13.08	□□□□□ -0.32
TRO-213	ENST00000440759	CCDC69	A6NI79	296 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	ZBBX	A8MT70	800 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	PIK3CD	O00329	1044 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	ARHGEF15	O94989	841 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	HOXC8	P31273	242 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	ICAM3	P32942	547 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	BFSP2	Q13515	415 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	MBTPS1	Q14703	1052 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	ADCK5	Q3MIX3	580 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	KCNV1	Q6PIU1	500 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	NFXL1	Q6ZNB6	911 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	MICU3	Q86XE3	530 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	CAGE1	Q8TC20	777 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	AFAP1L1	Q8TED9	768 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	SPATA33	Q96N06	139 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	LZTS2	Q9BRK4	669 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	NOD1	Q9Y239	953 aa		13.07	□□□□□ -0.32
TRO-213	ENST00000440759	XIRP2	A4UGR9	3374 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	SPATA31C2	B4DYI2	1134 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	NBN	O60934	754 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	PPFIA4	O75335	1185 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	LGALS2	P05162	132 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	NEFL	P07196	543 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	TGFB3	P10600	412 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	CKB	P12277	381 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	SELP	P16109	830 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	ATP2A2	P16615	1042 aa	Known RBP	13.06	□□□□□ -0.32
TRO-213	ENST00000440759	EXOSC10	Q01780	885 aa	Known RBP	13.06	□□□□□ -0.32
TRO-213	ENST00000440759	FUT2	Q10981	343 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	UBE2S	Q16763	222 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	PCNX4	Q63HM2	1172 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	TYW1B	Q6NUM6	668 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	APOA5	Q6Q788	366 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	LRRC8D	Q7L1W4	858 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	TRIM50	Q86XT4	487 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	C7orf31	Q8N865	590 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	KATNAL1	Q9BW62	490 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.06	□□□□□ -0.32
TRO-213	ENST00000440759	RTEL1	Q9NZ71	1219 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	SEC63	Q9UGP8	760 aa	Known RBP	13.06	□□□□□ -0.32
TRO-213	ENST00000440759	MSRA	Q9UJ68	235 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	BRPF3	Q9ULD4	1205 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	PCDHA11	Q9Y5I1	949 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	SLC12A7	Q9Y666	1083 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	KAT6A	Q92794	2004 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	BRWD1	Q9NSI6	2320 aa		13.06	□□□□□ -0.32
TRO-213	ENST00000440759	FIBP	O43427	364 aa		13.05	□□□□□ -0.32
TRO-213	ENST00000440759	CDC45	O75419	566 aa		13.05	□□□□□ -0.32
TRO-213	ENST00000440759	STAM2	O75886	525 aa		13.05	□□□□□ -0.32

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