RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ABCB4P21439 1286 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 KRT71Q3SY84 523 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
CCBE1-202ENST00000439986 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 ZSCAN10Q96SZ4 725 aaPredicted RBP12.58□□□□□ -0.4
CCBE1-202ENST00000439986 CARD10Q9BWT7 1032 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 STK32BQ9NY57 414 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 CDC42BPBQ9Y5S2 1711 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 GLI2P10070 1586 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 PCYT1AP49585 367 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 SLFN14P0C7P3 912 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 TPP2P29144 1249 aaPredicted RBP12.58□□□□□ -0.4
CCBE1-202ENST00000439986 KRT25Q7Z3Z0 450 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 SDR42E1Q8WUS8 393 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 TACO1Q9BSH4 297 aaKnown RBP12.58□□□□□ -0.4
CCBE1-202ENST00000439986 NEO1Q92859 1461 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 MYO1CO00159 1063 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 LPXNO60711 386 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 PANX2Q96RD6 677 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
CCBE1-202ENST00000439986 CASQ2O14958 399 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 CTIFO43310 598 aaKnown RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 BUB1O43683 1085 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 ACTN4O43707 911 aaKnown RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 KRT81Q14533 505 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 IQCB1Q15051 598 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 KCTD16Q68DU8 428 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 BPIFA3Q9BQP9 254 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 TRIM55Q9BYV6 548 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 VCX3BQ9H321 246 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 ARHGAP31Q2M1Z3 1444 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 ABCC3O15438 1527 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 CIAO1O76071 339 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 CCDC62Q6P9F0 684 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 MMP1P03956 469 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 YARSP54577 528 aaKnown RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 EPHA10Q5JZY3 1008 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 GADL1Q6ZQY3 521 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 ITM2BQ9Y287 266 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 H0YIN7 160 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 PPFIA4O75335 1185 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 CTNNA1P35221 906 aaKnown RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 CTSWP56202 376 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 BLIDQ8IZY5 108 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 SMCR8Q8TEV9 937 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 GMEB1Q9Y692 573 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 LMTK3Q96Q04 1460 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 TRIM64A6NGJ6 449 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 TRIM64BA6NI03 449 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 USP17L12C9JPN9 530 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 USP17L21D6R901 530 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 I3L4J1 428 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 APOA4P06727 396 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 PHKA1P46020 1223 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 BRDTQ58F21 947 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-202ENST00000439986 TMCC3Q9ULS5 477 aa12.57□□□□□ -0.4
CCBE1-202ENST00000439986 PMS1P54277 932 aaKnown RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 TUBA1BP68363 451 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 CCZ1BP86790 482 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 CCZ1P86791 482 aaPredicted RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 POU5F1Q01860 360 aaKnown RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 C9orf131Q5VYM1 1079 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 KAZNQ674X7 775 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 TUBA1AQ71U36 451 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 TRIM42Q8IWZ5 723 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 UHMK1Q8TAS1 419 aaKnown RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 U2AF1L4Q8WU68 220 aaKnown RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 LSM1O15116 133 aaKnown RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 ARHGEF16Q5VV41 709 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 EFCAB13Q8IY85 973 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 SKA2Q8WVK7 121 aaPredicted RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 RPS6KC1Q96S38 1066 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 CAPN11Q9UMQ6 739 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 THAP12O43422 761 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 MTMR3Q13615 1198 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 PEX26Q7Z412 305 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 GLG1Q92896 1179 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 SCYL1Q96KG9 808 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 APOL6Q9BWW8 343 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 PCDHB6Q9Y5E3 794 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 TFAP4Q01664 338 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 ASPHQ12797 758 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 CTAGE3PQ8IX95 158 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 TUBGCP2Q9BSJ2 902 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 TUBA8Q9NY65 449 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms