RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 PRKCZQ05513 592 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 CALCRLQ16602 461 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 ARL6IP4Q66PJ3 421 aaKnown RBP8.48□□□□□ -1.05
UBR3-205ENST00000439681 OLFML2BQ68BL8 750 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 MSL3Q8N5Y2 521 aaKnown RBP8.48□□□□□ -1.05
UBR3-205ENST00000439681 SLC5A5Q92911 643 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 GPRASP2Q96D09 838 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 ERO1AQ96HE7 468 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 CLIC6Q96NY7 704 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 APBA2Q99767 749 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 TINF2Q9BSI4 451 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 AGO4Q9HCK5 861 aaKnown RBP8.48□□□□□ -1.05
UBR3-205ENST00000439681 SRRDQ9UH36 339 aa8.48□□□□□ -1.05
UBR3-205ENST00000439681 ELP1O95163 1332 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 DHX15O43143 795 aaKnown RBP8.47□□□□□ -1.05
UBR3-205ENST00000439681 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
UBR3-205ENST00000439681 ITGB3BPQ13352 177 aaPredicted RBP8.47□□□□□ -1.05
UBR3-205ENST00000439681 MTMR1Q13613 665 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 TAPT1Q6NXT6 567 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 EEPD1Q7L9B9 569 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 NLRX1Q86UT6 975 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 FAM20AQ96MK3 541 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 BCAS3Q9H6U6 928 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 LMBRD1Q9NUN5 540 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.47□□□□□ -1.05
UBR3-205ENST00000439681 CEP350Q5VT06 3117 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 SYNGAP1Q96PV0 1343 aa8.47□□□□□ -1.05
UBR3-205ENST00000439681 RBM47A0AV96 593 aaKnown RBP8.46□□□□□ -1.05
UBR3-205ENST00000439681 MAFGO15525 162 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 PSMD10O75832 226 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 GNRH1P01148 92 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 TXKP42681 527 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 ME1P48163 572 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 SETQ01105 290 aaPredicted RBP8.46□□□□□ -1.05
UBR3-205ENST00000439681 SP2Q02086 613 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 IRF5Q13568 498 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 DTHD1Q6ZMT9 781 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 SEPT14Q6ZU15 432 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 FBXO16Q8IX29 292 aaPredicted RBP8.46□□□□□ -1.05
UBR3-205ENST00000439681 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.05
UBR3-205ENST00000439681 FERMT2Q96AC1 680 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 MPHOSPH6Q99547 160 aaKnown RBP8.46□□□□□ -1.05
UBR3-205ENST00000439681 CSRNP2Q9H175 543 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 PDGFCQ9NRA1 345 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 PCNTO95613 3336 aa8.46□□□□□ -1.05
UBR3-205ENST00000439681 IPO5O00410 1097 aaKnown RBP8.46□□□□□ -1.06
UBR3-205ENST00000439681 CUTAO60888 179 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 ARIH2O95376 493 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 KCNA2P16389 499 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 HOXD10P28358 340 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 CYP2C19P33261 490 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 TECP42680 631 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 FXR2P51116 673 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBR3-205ENST00000439681 SPIRE1Q08AE8 756 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 PRAMEF19Q5SWL8 479 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 TMEM63BQ5T3F8 832 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 ADALQ6DHV7 355 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 CCDC62Q6P9F0 684 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 SHC4Q6S5L8 630 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 B3GNT9Q6UX72 402 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 OTOP1Q7RTM1 612 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 SLFN12Q8IYM2 578 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 ZNF579Q8NAF0 562 aaKnown RBP8.46□□□□□ -1.06
UBR3-205ENST00000439681 RIT2Q99578 217 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 ZNF577Q9BSK1 485 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 TTC12Q9H892 705 aaPredicted RBP8.46□□□□□ -1.06
UBR3-205ENST00000439681 VTA1Q9NP79 307 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 VAV3Q9UKW4 847 aa8.46□□□□□ -1.06
UBR3-205ENST00000439681 VWA3AA6NCI4 1184 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 FOXN1O15353 648 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 TGFB3P10600 412 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 ACVR2BQ13705 512 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 PDIA5Q14554 519 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 GNPTABQ3T906 1256 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 SPECC1Q5M775 1068 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 USP49Q70CQ1 688 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 IGSF22Q8N9C0 903 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 TRIB2Q92519 343 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 CDHR1Q96JP9 859 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 PKD2L1Q9P0L9 805 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
UBR3-205ENST00000439681 PCDHA12Q9UN75 941 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 A0A1W2PQ27 194 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 A0A1W2PQ64 194 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 A0A1W2PQD8 194 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 MARCH6O60337 910 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 ZNF865P0CJ78 1059 aaPredicted RBP8.45□□□□□ -1.06
UBR3-205ENST00000439681 HSPA8P11142 646 aaKnown RBP8.45□□□□□ -1.06
UBR3-205ENST00000439681 CMA1P23946 247 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 LONP1P36776 959 aaKnown RBP8.45□□□□□ -1.06
UBR3-205ENST00000439681 TRIM32Q13049 653 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 ARHGEF6Q15052 776 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 LY6KQ17RY6 165 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 LRCH2Q5VUJ6 765 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 TRPV1Q8NER1 839 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 SENP7Q9BQF6 1050 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 ABHD16BQ9H3Z7 469 aa8.45□□□□□ -1.06
UBR3-205ENST00000439681 TBC1D22BQ9NU19 505 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms