RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 CCDC73Q6ZRK6 1079 aa11.3□□□□□ -0.6
CBX5-202ENST00000439541 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
CBX5-202ENST00000439541 PLA2G4DQ86XP0 818 aa11.3□□□□□ -0.6
CBX5-202ENST00000439541 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
CBX5-202ENST00000439541 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
CBX5-202ENST00000439541 WDR11Q9BZH6 1224 aa11.3□□□□□ -0.6
CBX5-202ENST00000439541 THSD7BQ9C0I4 1608 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 DNAJC25-GNG10A0A024R161 153 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 LAD1O00515 517 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 NR3C2P08235 984 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 CMA1P23946 247 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 ADORA2AP29274 412 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 CCND2P30279 289 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 PRPHP41219 470 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
CBX5-202ENST00000439541 C17orf99Q6UX52 265 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
CBX5-202ENST00000439541 FMR1NBQ8N0W7 255 aaPredicted RBP11.29□□□□□ -0.6
CBX5-202ENST00000439541 PDILTQ8N807 584 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 ENGASEQ8NFI3 743 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 NAP1L4Q99733 375 aaKnown RBP11.29□□□□□ -0.6
CBX5-202ENST00000439541 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 TTC12Q9H892 705 aaPredicted RBP11.29□□□□□ -0.6
CBX5-202ENST00000439541 ZFYVE28Q9HCC9 887 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 UBIAD1Q9Y5Z9 338 aa11.29□□□□□ -0.6
CBX5-202ENST00000439541 MARCH6O60337 910 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 COBLO75128 1261 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 RGS20O76081 388 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 HPSEQ9Y251 543 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 DDX39AO00148 427 aaKnown RBP11.28□□□□□ -0.6
CBX5-202ENST00000439541 MEIS1O00470 390 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 CA12O43570 354 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
CBX5-202ENST00000439541 CTGFP29279 349 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
CBX5-202ENST00000439541 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 MTMR1Q13613 665 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
CBX5-202ENST00000439541 CAMK4Q16566 473 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 EEPD1Q7L9B9 569 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 VSIG10LQ86VR7 867 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
CBX5-202ENST00000439541 DNERQ8NFT8 737 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 PLIN2Q99541 437 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 ARHGAP39Q9C0H5 1083 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 KCNH7Q9NS40 1196 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 KCNH3Q9ULD8 1083 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 IVNS1ABPQ9Y6Y0 642 aa11.28□□□□□ -0.6
CBX5-202ENST00000439541 ZNF236Q9UL36 1845 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 CHMP2AO43633 222 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 SORBS3O60504 671 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 TBC1D8O95759 1140 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 SYKP43405 635 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
CBX5-202ENST00000439541 SETQ01105 290 aaPredicted RBP11.27□□□□□ -0.61
CBX5-202ENST00000439541 SPIRE1Q08AE8 756 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 ITGB3BPQ13352 177 aaPredicted RBP11.27□□□□□ -0.61
CBX5-202ENST00000439541 GRB14Q14449 540 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 KARSQ15046 597 aaKnown RBP11.27□□□□□ -0.61
CBX5-202ENST00000439541 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 IGSF22Q8N9C0 903 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 RNF214Q8ND24 703 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 LRRC15Q8TF66 581 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 ERCC4Q92889 916 aaPredicted RBP11.27□□□□□ -0.61
CBX5-202ENST00000439541 ZNF577Q9BSK1 485 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 MMTAG2Q9BU76 263 aaKnown RBP11.27□□□□□ -0.61
CBX5-202ENST00000439541 JADE2Q9NQC1 790 aa11.27□□□□□ -0.61
CBX5-202ENST00000439541 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
CBX5-202ENST00000439541 FAM237AA0A1B0GTK4 181 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 IPO5O00410 1097 aaKnown RBP11.26□□□□□ -0.61
CBX5-202ENST00000439541 POLR2DO15514 142 aaKnown RBP11.26□□□□□ -0.61
CBX5-202ENST00000439541 ATP9AO75110 1047 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 EDNRBP24530 442 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 MAPK4P31152 587 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 CAP1Q01518 475 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 LRCH2Q5VUJ6 765 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 NCAPH2Q6IBW4 605 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
CBX5-202ENST00000439541 SLC5A5Q92911 643 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 DHX58Q96C10 678 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
CBX5-202ENST00000439541 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 PDCL3Q9H2J4 239 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 BCAS3Q9H6U6 928 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
CBX5-202ENST00000439541 FAM13BQ9NYF5 915 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
CBX5-202ENST00000439541 LRWD1Q9UFC0 647 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 PCDHA12Q9UN75 941 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 PLXNA1Q9UIW2 1896 aa11.26□□□□□ -0.61
CBX5-202ENST00000439541 EML1O00423 815 aa11.25□□□□□ -0.61
CBX5-202ENST00000439541 TBX3O15119 743 aa11.25□□□□□ -0.61
CBX5-202ENST00000439541 GAS7O60861 476 aa11.25□□□□□ -0.61
CBX5-202ENST00000439541 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
CBX5-202ENST00000439541 PSMD10O75832 226 aa11.25□□□□□ -0.61
CBX5-202ENST00000439541 ZNF202O95125 648 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms