RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 GDF3Q9NR23 364 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 KLC4Q9NSK0 619 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 ANAPC4Q9UJX5 808 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 SUFUQ9UMX1 484 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 UTRNP46939 3433 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 CCDC194A0A1B0GVG4 234 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 PALMO75781 387 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 DDR1Q08345 913 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 IFT20Q8IY31 132 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 PYM1Q9BRP8 204 aaKnown RBP14.97□□□□□ -0.01
PCNX3-202ENST00000439247 PDGFDQ9GZP0 370 aaPredicted RBP14.97□□□□□ -0.01
PCNX3-202ENST00000439247 NDST4Q9H3R1 872 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 LRRC4CQ9HCJ2 640 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 FAM170AA1A519 330 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 PRLRP16471 622 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 ITIH3Q06033 890 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 DYMQ7RTS9 669 aa14.97□□□□□ -0.01
PCNX3-202ENST00000439247 ZSCAN29Q8IWY8 852 aaPredicted RBP14.97□□□□□ -0.01
PCNX3-202ENST00000439247 BCCIPQ9P287 314 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCNX3-202ENST00000439247 DUOX1Q9NRD9 1551 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 CCDC172P0C7W6 258 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 SETQ01105 290 aaPredicted RBP14.96□□□□□ -0.01
PCNX3-202ENST00000439247 EHHADHQ08426 723 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 ITGB3BPQ13352 177 aaPredicted RBP14.96□□□□□ -0.01
PCNX3-202ENST00000439247 CCDC40Q4G0X9 1142 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 VWA3BQ502W6 1294 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 CABP7Q86V35 215 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 ATP6V1G3Q96LB4 118 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 PACSIN1Q9BY11 444 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 SLC40A1Q9NP59 571 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 JAG2Q9Y219 1238 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 FLT1P17948 1338 aa14.96□□□□□ -0.01
PCNX3-202ENST00000439247 RAD51CO43502 376 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 CDK17Q00537 523 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 LRRC41Q15345 812 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 SLC35G1Q2M3R5 365 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 CCDC152Q4G0S7 254 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 CFAP221Q4G0U5 840 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 TPTE2Q6XPS3 522 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 CEP57Q86XR8 500 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 KIRREL3Q8IZU9 778 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 VCPKMTQ9H867 229 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 PCDHA6Q9UN73 950 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 PCDHA8Q9Y5H6 950 aa14.96□□□□□ -0.02
PCNX3-202ENST00000439247 A0A1W2PQJ5 194 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 DNM1LO00429 736 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 DDAH1O94760 285 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 TECP42680 631 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 BAP1Q92560 729 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 PCDHA4Q9UN74 947 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 OPLAHO14841 1288 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CALM1P0DP23 149 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CALM2P0DP24 149 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CALM3P0DP25 149 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 TM4SF1P30408 202 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CHRNDQ07001 517 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 HLTFQ14527 1009 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCNX3-202ENST00000439247 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 HEATR3Q7Z4Q2 680 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CELF1Q92879 486 aaKnown RBP14.95□□□□□ -0.02
PCNX3-202ENST00000439247 TNRC6CQ9HCJ0 1690 aaKnown RBP14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CASZ1Q86V15 1759 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 DCDC2CA8MYV0 355 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CHRM1P11229 460 aaPredicted RBP14.95□□□□□ -0.02
PCNX3-202ENST00000439247 KLRC1P26715 233 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 PAK2Q13177 524 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 CYFIP2Q96F07 1278 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 NOX5Q96PH1 765 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
PCNX3-202ENST00000439247 BICDL2A1A5D9 508 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 FRMD3A2A2Y4 597 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 RGL2O15211 777 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 HNRNPH3P31942 346 aaKnown RBP14.94□□□□□ -0.02
PCNX3-202ENST00000439247 FLT3P36888 993 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 E2F5Q15329 346 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 LETM2Q2VYF4 491 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 HGSNATQ68CP4 663 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 RCSD1Q6JBY9 416 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 FAM228AQ86W67 206 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 NOC3LQ8WTT2 800 aaKnown RBP14.94□□□□□ -0.02
PCNX3-202ENST00000439247 OSBPL7Q9BZF2 842 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 NYXQ9GZU5 481 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 HAUS2Q9NVX0 235 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 LAMB2P55268 1798 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 TLR2O60603 784 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 RASSF9O75901 435 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 SERPINB2P05120 415 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 GOLGA8HP0CJ92 632 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 SLC10A5Q5PT55 438 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 CACNA2D4Q7Z3S7 1137 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 CNBD1Q8NA66 436 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 CCDC114Q96M63 670 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 NEUROG2Q9H2A3 272 aa14.94□□□□□ -0.02
PCNX3-202ENST00000439247 TSPY2A6NKD2 308 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 LCA5LO95447 670 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 TNFRSF8P28908 595 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 ASTE1Q2TB18 679 aaPredicted RBP14.93□□□□□ -0.02
PCNX3-202ENST00000439247 FIGNQ5HY92 759 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 CNOT8Q9UFF9 292 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 778.9 ms