RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 ZKSCAN3Q9BRR0 538 aa7.93□□□□□ -1.14
ERCC8-203ENST00000439176 DSCC1Q9BVC3 393 aa7.93□□□□□ -1.14
ERCC8-203ENST00000439176 NOC4LQ9BVI4 516 aaKnown RBP7.93□□□□□ -1.14
ERCC8-203ENST00000439176 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
ERCC8-203ENST00000439176 TRPV6Q9H1D0 765 aa7.93□□□□□ -1.14
ERCC8-203ENST00000439176 ALDH8A1Q9H2A2 487 aaPredicted RBP7.93□□□□□ -1.14
ERCC8-203ENST00000439176 SLC28A3Q9HAS3 691 aa7.93□□□□□ -1.14
ERCC8-203ENST00000439176 NOD1Q9Y239 953 aa7.93□□□□□ -1.14
ERCC8-203ENST00000439176 MRPL11Q9Y3B7 192 aaKnown RBP7.93□□□□□ -1.14
ERCC8-203ENST00000439176 SLC4A7Q9Y6M7 1214 aa7.93□□□□□ -1.14
ERCC8-203ENST00000439176 LAMA2P24043 3122 aaKnown RBP7.93□□□□□ -1.14
ERCC8-203ENST00000439176 ZBBXA8MT70 800 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 B4E1Z4 1266 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 GOLGA8HP0CJ92 632 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 RFC2P35250 354 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 CCL23P55773 120 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 PURAQ00577 322 aaKnown RBP7.92□□□□□ -1.14
ERCC8-203ENST00000439176 PTPN11Q06124 597 aaPredicted RBP7.92□□□□□ -1.14
ERCC8-203ENST00000439176 BFSP2Q13515 415 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 STXBP2Q15833 593 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 CDC37Q16543 378 aaPredicted RBP7.92□□□□□ -1.14
ERCC8-203ENST00000439176 IFIT1BQ5T764 474 aaKnown RBP7.92□□□□□ -1.14
ERCC8-203ENST00000439176 RASIP1Q5U651 963 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 SLC30A10Q6XR72 485 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 C16orf59Q7L2K0 433 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 OTOP2Q7RTS6 562 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 CCDC155Q8N6L0 562 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 RUFY2Q8WXA3 655 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 ANKS1AQ92625 1134 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 IWS1Q96ST2 819 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 COL25A1Q9BXS0 654 aaPredicted RBP7.92□□□□□ -1.14
ERCC8-203ENST00000439176 UBA5Q9GZZ9 404 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 ZSWIM5Q9P217 1185 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 DDX49Q9Y6V7 483 aaKnown RBP7.92□□□□□ -1.14
ERCC8-203ENST00000439176 TNKSO95271 1327 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 NEDD4P46934 1319 aa7.92□□□□□ -1.14
ERCC8-203ENST00000439176 ERICH2A1L162 156 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 A6NJR5 290 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 GRXCR1A8MXD5 290 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 IGHDP01880 384 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
ERCC8-203ENST00000439176 EDNRBP24530 442 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 CHMP4BP1P59074 171 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 SART3Q15020 963 aaKnown RBP7.91□□□□□ -1.14
ERCC8-203ENST00000439176 NBPF20Q3BBV1 942 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 ARHGEF16Q5VV41 709 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 SEPT14Q6ZU15 432 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 FBXO11Q86XK2 927 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 ADGRF4Q8IZF3 695 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 ENAHQ8N8S7 591 aaPredicted RBP7.91□□□□□ -1.14
ERCC8-203ENST00000439176 RMDN3Q96TC7 470 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 AMNQ9BXJ7 453 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 VAT1LQ9HCJ6 419 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 TRMT13Q9NUP7 481 aaKnown RBP7.91□□□□□ -1.14
ERCC8-203ENST00000439176 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
ERCC8-203ENST00000439176 V9GY48 417 aaPredicted RBP7.91□□□□□ -1.14
ERCC8-203ENST00000439176 GRIN2DO15399 1336 aa7.91□□□□□ -1.14
ERCC8-203ENST00000439176 KIF28PB7ZC32 967 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 EIF3JO75822 258 aaKnown RBP7.9□□□□□ -1.14
ERCC8-203ENST00000439176 PARNO95453 639 aaKnown RBP7.9□□□□□ -1.14
ERCC8-203ENST00000439176 CFBP00751 764 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 GH1P01241 217 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 CYP2C9P11712 490 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 ATP2A2P16615 1042 aaKnown RBP7.9□□□□□ -1.14
ERCC8-203ENST00000439176 IGFBP4P22692 258 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 DGKDQ16760 1214 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 QRICH1Q2TAL8 776 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 TMEM63BQ5T3F8 832 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 PPP2R2DQ66LE6 453 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 KCNV1Q6PIU1 500 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 DEFB128Q7Z7B8 93 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 RALYLQ86SE5 291 aaKnown RBP7.9□□□□□ -1.14
ERCC8-203ENST00000439176 SAMD3Q8N6K7 520 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 IL27Q8NEV9 243 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 EXOC6Q8TAG9 804 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 SYTL5Q8TDW5 730 aaPredicted RBP7.9□□□□□ -1.14
ERCC8-203ENST00000439176 KATNAL1Q9BW62 490 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 FTOQ9C0B1 505 aaKnown RBP eCLIP7.9□□□□□ -1.14
ERCC8-203ENST00000439176 WNT8AQ9H1J5 351 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 MRVI1Q9Y6F6 885 aa7.9□□□□□ -1.14
ERCC8-203ENST00000439176 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 UMODL1Q5DID0 1318 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 KLRF2D3W0D1 207 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 PTGS1P23219 599 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 LAMC2Q13753 1193 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 PTGISQ16647 500 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 AMHR2Q16671 573 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 TMEM67Q5HYA8 995 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 TJAP1Q5JTD0 557 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 CHST3Q7LGC8 479 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 C7orf31Q8N865 590 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 CAGE1Q8TC20 777 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 PHOSPHO2Q8TCD6 241 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 AFG1LQ8WV93 481 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 ATXN2LQ8WWM7 1075 aaKnown RBP7.89□□□□□ -1.15
ERCC8-203ENST00000439176 PPM1EQ8WY54 764 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 SCLYQ96I15 445 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 TAAR1Q96RJ0 339 aa7.89□□□□□ -1.15
ERCC8-203ENST00000439176 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms