RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 MAK16Q9BXY0 300 aaKnown RBP13.49□□□□□ -0.25
TCOF1-205ENST00000439160 PARVGQ9HBI0 331 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 SOWAHDA6NJG2 315 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 E9PMD0 336 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 KCNK3O14649 394 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 GAP43P17677 238 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 SCAF8Q9UPN6 1271 aaKnown RBP13.49□□□□□ -0.25
TCOF1-205ENST00000439160 SUGT1Q9Y2Z0 365 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 GYS1P13807 737 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 DDIT3P35638 169 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 SLC8A3P57103 927 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 RNF207Q6ZRF8 634 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 ZNF365Q70YC5 407 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 ACRBPQ8NEB7 543 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 SYCE1Q8N0S2 351 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
TCOF1-205ENST00000439160 RASA1P20936 1047 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
TCOF1-205ENST00000439160 MTERF2Q49AM1 385 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 MICALCLQ6ZW33 695 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 SLC35F6Q8N357 371 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 RMDN3Q96TC7 470 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 RSPH14Q9UHP6 348 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 POTEB3A0JP26 581 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 POTECB2RU33 542 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 LRRN2O75325 713 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 POTEBQ6S5H4 581 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 ZNF526Q8TF50 670 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-205ENST00000439160 IQCGQ9H095 443 aaKnown RBP13.48□□□□□ -0.25
TCOF1-205ENST00000439160 KMT5AQ9NQR1 393 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 HPS5Q9UPZ3 1129 aa13.48□□□□□ -0.25
TCOF1-205ENST00000439160 UBE2Q2LH0YL09 131 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 IFT20Q8IY31 132 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 ASIC3Q9UHC3 531 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 H0YCG3 227 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 INO80B-WBP1J3KQ70 363 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
TCOF1-205ENST00000439160 PRCPP42785 496 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 SND1Q7KZF4 910 aaKnown RBP eCLIP13.47□□□□□ -0.25
TCOF1-205ENST00000439160 INO80BQ9C086 356 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-205ENST00000439160 SLC5A4Q9NY91 659 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 UTP11Q9Y3A2 253 aaKnown RBP13.47□□□□□ -0.25
TCOF1-205ENST00000439160 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
TCOF1-205ENST00000439160 AFPP02771 609 aaKnown RBP13.47□□□□□ -0.25
TCOF1-205ENST00000439160 CNGA1P29973 690 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-205ENST00000439160 RNF169Q8NCN4 708 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 PPP1R14CQ8TAE6 165 aa13.47□□□□□ -0.25
TCOF1-205ENST00000439160 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 FGFR2P21802 821 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 MYL7Q01449 175 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 FAM160B1Q5W0V3 765 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 ADAT2Q7Z6V5 191 aaKnown RBP13.46□□□□□ -0.25
TCOF1-205ENST00000439160 CCDC105Q8IYK2 499 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 CDHR1Q96JP9 859 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 ADGRB2O60241 1585 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 HPDP32754 393 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-205ENST00000439160 EHHADHQ08426 723 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 THAP9Q9H5L6 903 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 FBXO2Q9UK22 296 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-205ENST00000439160 KIF4AO95239 1232 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 CCND2P30279 289 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
TCOF1-205ENST00000439160 CCNA1P78396 465 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 PSMD2Q13200 908 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 UNC13DQ70J99 1090 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 SPTLC3Q9NUV7 552 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.25
TCOF1-205ENST00000439160 REREQ9P2R6 1566 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 STAT3P40763 770 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 SLC10A5Q5PT55 438 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.26
TCOF1-205ENST00000439160 ZNRF3Q9ULT6 936 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 HYOU1Q9Y4L1 999 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 BCL9O00512 1426 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 MYOM1P52179 1685 aa13.46□□□□□ -0.26
TCOF1-205ENST00000439160 POTEFA5A3E0 1075 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 FAM133AQ8N9E0 248 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 MRRFQ96E11 262 aaKnown RBP13.45□□□□□ -0.26
TCOF1-205ENST00000439160 ACCSQ96QU6 501 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms