RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 PDXDC2PQ6P474 469 aa19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 ZNF449Q6P9G9 518 aa19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 ADAT2Q7Z6V5 191 aaKnown RBP19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 DHTKD1Q96HY7 919 aaPredicted RBP19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 ROBO2Q9HCK4 1378 aa19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 RBBP5Q15291 538 aaKnown RBP19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 TUBGCP2Q9BSJ2 902 aa19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 ZNF341Q9BYN7 854 aa19.87■□□□□ 0.77
ARHGEF28-204ENST00000437974 KRT10P13645 584 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 SLC39A14Q15043 492 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 C11orf57Q6ZUT1 292 aaPredicted RBP19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 ZBTB33Q86T24 672 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 TDRD7Q8NHU6 1098 aaKnown RBP19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 DPH5Q9H2P9 285 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 MED7O43513 233 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 ANXA13P27216 316 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 PPP1R2P3Q6NXS1 205 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 PCIF1Q9H4Z3 704 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 BUB1BO60566 1050 aaPredicted RBP19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 RC3H1Q5TC82 1133 aaKnown RBP19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 C7orf31Q8N865 590 aa19.86■□□□□ 0.77
ARHGEF28-204ENST00000437974 EIF3CLB5ME19 914 aaKnown RBP19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 MEIS1O00470 390 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 ELF1P32519 619 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 PCK1P35558 622 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 ARHGAP25P42331 645 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 MESDQ14696 234 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 PTPN21Q16825 1174 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 EIF3CQ99613 913 aaKnown RBP19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 LRRC4Q9HBW1 653 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 PPFIA4O75335 1185 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 ASNSP08243 561 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 CDK8P49336 464 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 LMNB2Q03252 620 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 FTOQ9C0B1 505 aaKnown RBP eCLIP19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 HOMER3Q9NSC5 361 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 ECE1P42892 770 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 CACNB1Q02641 598 aaPredicted RBP19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 PCDHA5Q9Y5H7 936 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 PASKQ96RG2 1323 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 A0A087WWV3 80 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 CASP14P31944 242 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 RUNDC3BQ96NL0 473 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 GCNAQ96QF7 691 aa19.85■□□□□ 0.77
ARHGEF28-204ENST00000437974 MBD5Q9P267 1494 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 SURF1Q15526 300 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 TMEM179Q6ZVK1 233 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 PUS7LQ9H0K6 701 aaKnown RBP19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 NXF1Q9UBU9 619 aaKnown RBP19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 PNMA6FA0A0J9YX94 578 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 EIF2AK2P19525 551 aaKnown RBP19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 PARD3BQ8TEW8 1205 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 P2RX5Q93086 422 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 SAMD9LQ8IVG5 1584 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 LRRC41Q15345 812 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 DPCR1Q3MIW9 517 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 EEF2KMTQ96G04 330 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 PPP1R16BQ96T49 567 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 MYL3P08590 195 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 GNGT1P63211 74 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 ARHGAP4P98171 946 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 MYO3BQ8WXR4 1341 aa19.84■□□□□ 0.77
ARHGEF28-204ENST00000437974 CLIC2O15247 247 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 YWHAGP61981 247 aaKnown RBP eCLIP19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 PNMA8AQ86V59 439 aaPredicted RBP19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 SIRT2Q8IXJ6 389 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 LMNTD2Q8IXW0 634 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 GPR101Q96P66 508 aaPredicted RBP19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 RNF207Q6ZRF8 634 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 ZNF653Q96CK0 615 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 HDAC11Q96DB2 347 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 HINFPQ9BQA5 517 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 EPN1Q9Y6I3 576 aaPredicted RBP19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 MAPK4P31152 587 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 RASSF2P50749 326 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 OSTNP61366 133 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 POLR3EQ9NVU0 708 aa19.83■□□□□ 0.77
ARHGEF28-204ENST00000437974 GOLGA8SH3BPF8 625 aa19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 SH2B2O14492 632 aaPredicted RBP19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 PRPF3O43395 683 aaKnown RBP19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 HEXIM1O94992 359 aaKnown RBP19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 ARL4AP40617 200 aa19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 CUL4AQ13619 759 aa19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 UBE2SQ16763 222 aa19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 CCNYQ8ND76 341 aa19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 MICAL1Q8TDZ2 1067 aa19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 ZBED2Q9BTP6 218 aa19.83■□□□□ 0.76
ARHGEF28-204ENST00000437974 SGK1O00141 431 aa19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 LARGE1O95461 756 aa19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 ZNF853P0CG23 659 aa19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 KRT3P12035 628 aa19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 SMYD4Q8IYR2 804 aaPredicted RBP19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 SIX6OS1Q8N1H7 587 aa19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 RPF1Q9H9Y2 349 aaKnown RBP19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 PARVGQ9HBI0 331 aa19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 ANGPTL3Q9Y5C1 460 aa19.82■□□□□ 0.76
ARHGEF28-204ENST00000437974 GOLGA8KD6RF30 607 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms