RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TMEM63BQ5T3F8 832 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 CHST3Q7LGC8 479 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 RALYLQ86SE5 291 aaKnown RBP9.03□□□□□ -0.96
VPS50-203ENST00000436177 ADGRF4Q8IZF3 695 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 ENAHQ8N8S7 591 aaPredicted RBP9.03□□□□□ -0.96
VPS50-203ENST00000436177 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
VPS50-203ENST00000436177 RUFY2Q8WXA3 655 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 IWS1Q96ST2 819 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 CPVLQ9H3G5 476 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 VAT1LQ9HCJ6 419 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 PCDHA11Q9Y5I1 949 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 PRUNE2Q8WUY3 3088 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 LRRC37A2A6NM11 1700 aa9.02□□□□□ -0.96
VPS50-203ENST00000436177 NCOR1O75376 2440 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 CFBP00751 764 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 EIF2AK2P19525 551 aaKnown RBP9.02□□□□□ -0.97
VPS50-203ENST00000436177 CASTP20810 708 aaKnown RBP9.02□□□□□ -0.97
VPS50-203ENST00000436177 RABGGTBP53611 331 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 SART3Q15020 963 aaKnown RBP9.02□□□□□ -0.97
VPS50-203ENST00000436177 CCDC85BQ15834 202 aaPredicted RBP9.02□□□□□ -0.97
VPS50-203ENST00000436177 PTGISQ16647 500 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 DGKDQ16760 1214 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 QRICH1Q2TAL8 776 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 C7orf31Q8N865 590 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 USP38Q8NB14 1042 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 CAGE1Q8TC20 777 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 AFG1LQ8WV93 481 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 ATXN2LQ8WWM7 1075 aaKnown RBP9.02□□□□□ -0.97
VPS50-203ENST00000436177 COPS5Q92905 334 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 KATNAL1Q9BW62 490 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 AMNQ9BXJ7 453 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.97
VPS50-203ENST00000436177 BDP1A6H8Y1 2624 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 KLRF2D3W0D1 207 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 EIF3JO75822 258 aaKnown RBP9.01□□□□□ -0.97
VPS50-203ENST00000436177 MRPS5P82675 430 aaKnown RBP9.01□□□□□ -0.97
VPS50-203ENST00000436177 AAK1Q2M2I8 961 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 HOMER1Q86YM7 354 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 DHX37Q8IY37 1157 aaKnown RBP9.01□□□□□ -0.97
VPS50-203ENST00000436177 EXOC6Q8TAG9 804 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 AFAP1L1Q8TED9 768 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 ANKS1AQ92625 1134 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 TAAR1Q96RJ0 339 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 CDH23Q9H251 3354 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 ZSWIM5Q9P217 1185 aa9.01□□□□□ -0.97
VPS50-203ENST00000436177 YBX2Q9Y2T7 364 aaKnown RBP9.01□□□□□ -0.97
VPS50-203ENST00000436177 MYO9BQ13459 2157 aa9□□□□□ -0.97
VPS50-203ENST00000436177 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
VPS50-203ENST00000436177 BAIAP3O94812 1187 aa9□□□□□ -0.97
VPS50-203ENST00000436177 ARIH2O95376 493 aa9□□□□□ -0.97
VPS50-203ENST00000436177 PARNO95453 639 aaKnown RBP9□□□□□ -0.97
VPS50-203ENST00000436177 CA3P07451 260 aa9□□□□□ -0.97
VPS50-203ENST00000436177 NR3C2P08235 984 aa9□□□□□ -0.97
VPS50-203ENST00000436177 MMP3P08254 477 aa9□□□□□ -0.97
VPS50-203ENST00000436177 MYCLP12524 364 aaPredicted RBP9□□□□□ -0.97
VPS50-203ENST00000436177 SELPP16109 830 aa9□□□□□ -0.97
VPS50-203ENST00000436177 ARHGAP1Q07960 439 aa9□□□□□ -0.97
VPS50-203ENST00000436177 LAMC2Q13753 1193 aa9□□□□□ -0.97
VPS50-203ENST00000436177 LY6KQ17RY6 165 aa9□□□□□ -0.97
VPS50-203ENST00000436177 CCDC62Q6P9F0 684 aa9□□□□□ -0.97
VPS50-203ENST00000436177 KCNV1Q6PIU1 500 aa9□□□□□ -0.97
VPS50-203ENST00000436177 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
VPS50-203ENST00000436177 ANKK1Q8NFD2 765 aa9□□□□□ -0.97
VPS50-203ENST00000436177 PHOSPHO2Q8TCD6 241 aa9□□□□□ -0.97
VPS50-203ENST00000436177 PPP1R13LQ8WUF5 828 aa9□□□□□ -0.97
VPS50-203ENST00000436177 PXMP2Q9NR77 195 aa9□□□□□ -0.97
VPS50-203ENST00000436177 PCDHA1Q9Y5I3 950 aa9□□□□□ -0.97
VPS50-203ENST00000436177 EYSQ5T1H1 3165 aa9□□□□□ -0.97
VPS50-203ENST00000436177 VCANP13611 3396 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 GCOM1H8Y6P7 765 aaPredicted RBP8.99□□□□□ -0.97
VPS50-203ENST00000436177 TNFRSF10AO00220 468 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 NOP56O00567 594 aaKnown RBP8.99□□□□□ -0.97
VPS50-203ENST00000436177 IFIT3O14879 490 aaKnown RBP8.99□□□□□ -0.97
VPS50-203ENST00000436177 ZBTB5O15062 677 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 TLL1O43897 1013 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 IGHDP01880 384 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 IQCF3P0C7M6 154 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 POLR2MP0CAP2 368 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 ZNF286BP0CG31 522 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 MYOGP15173 224 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 CCND2P30279 289 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 ADGRE1Q14246 886 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 GNPTABQ3T906 1256 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 TYW1BQ6NUM6 668 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 HERC6Q8IVU3 1022 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 PPTC7Q8NI37 304 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 ADAMTS19Q8TE59 1207 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 SPATA33Q96N06 139 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 ASB2Q96Q27 587 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 ALG1Q9BT22 464 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 PRDM6Q9NQX0 595 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 MAP3K20Q9NYL2 800 aaKnown RBP8.99□□□□□ -0.97
VPS50-203ENST00000436177 COL20A1Q9P218 1284 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 RABGEF1Q9UJ41 708 aa8.99□□□□□ -0.97
VPS50-203ENST00000436177 EFCAB14O75071 495 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 HOXA13P31271 388 aaPredicted RBP8.98□□□□□ -0.97
VPS50-203ENST00000436177 HSD17B4P51659 736 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms