RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
LINC00028-201ENST00000435497 IKBKEQ14164 716 aa15.86■□□□□ 0.13
LINC00028-201ENST00000435497 MYSM1Q5VVJ2 828 aa15.86■□□□□ 0.13
LINC00028-201ENST00000435497 FAM117BQ6P1L5 589 aa15.86■□□□□ 0.13
LINC00028-201ENST00000435497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.86■□□□□ 0.13
LINC00028-201ENST00000435497 DHX37Q8IY37 1157 aaKnown RBP15.86■□□□□ 0.13
LINC00028-201ENST00000435497 STAG2Q8N3U4 1231 aa15.86■□□□□ 0.13
LINC00028-201ENST00000435497 MRVI1Q9Y6F6 885 aa15.86■□□□□ 0.13
LINC00028-201ENST00000435497 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
LINC00028-201ENST00000435497 SIP14410 1827 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 SORBS3O60504 671 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 GPR37L1O60883 481 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 PPP1R11O60927 126 aaPredicted RBP15.85■□□□□ 0.13
LINC00028-201ENST00000435497 PPFIA4O75335 1185 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 PARP1P09874 1014 aaKnown RBP15.85■□□□□ 0.13
LINC00028-201ENST00000435497 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
LINC00028-201ENST00000435497 MFAP1P55081 439 aaKnown RBP15.85■□□□□ 0.13
LINC00028-201ENST00000435497 SP2Q02086 613 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 HSDL1Q3SXM5 330 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 TMEM31Q5JXX7 168 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 STOX1Q6ZVD7 989 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 MTMR8Q96EF0 704 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 PDCD2LQ9BRP1 358 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 KATNAL1Q9BW62 490 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 ARIH1Q9Y4X5 557 aaPredicted RBP15.85■□□□□ 0.13
LINC00028-201ENST00000435497 MICAL3Q7RTP6 2002 aa15.85■□□□□ 0.13
LINC00028-201ENST00000435497 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 PI4K2BG5E9Z4 385 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 DHX16O60231 1041 aaKnown RBP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 EFCAB14O75071 495 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 LGR5O75473 907 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 MYCLP12524 364 aaPredicted RBP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 NT5C2P49902 561 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 CELF3Q5SZQ8 465 aaKnown RBP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 VSIG10LQ86VR7 867 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 PLEKHM2Q8IWE5 1019 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 DBF4BQ8NFT6 615 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 IL31RAQ8NI17 732 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 GPKOWQ92917 476 aaPredicted RBP eCLIP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 ZFP91Q96JP5 570 aaPredicted RBP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 C17orf80Q9BSJ5 609 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 C16orf70Q9BSU1 422 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 OSBPL7Q9BZF2 842 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 BCAS3Q9H6U6 928 aa15.84■□□□□ 0.13
LINC00028-201ENST00000435497 UBE2ZQ9H832 354 aaPredicted RBP15.84■□□□□ 0.13
LINC00028-201ENST00000435497 MUC6Q6W4X9 2439 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 FAM86C2PA6NEL3 165 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 HTRA4P83105 476 aaPredicted RBP15.83■□□□□ 0.12
LINC00028-201ENST00000435497 SLC35G1Q2M3R5 365 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 SERINC5Q86VE9 423 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 SMC5Q8IY18 1101 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 SPATA33Q96N06 139 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 AMNQ9BXJ7 453 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 OSBPL3Q9H4L5 887 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 INSL6Q9Y581 213 aa15.83■□□□□ 0.12
LINC00028-201ENST00000435497 RSPH10B2B2RC85 870 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 GGPS1O95749 300 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 RSPH10BP0C881 870 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 HOXA13P31271 388 aaPredicted RBP15.82■□□□□ 0.12
LINC00028-201ENST00000435497 PGM5Q15124 567 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 SEC23AQ15436 765 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 LEXMQ3ZCV2 418 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 B4GALNT3Q6L9W6 998 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 FAM178BQ8IXR5 827 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
LINC00028-201ENST00000435497 DSCC1Q9BVC3 393 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 MAD2L2Q9UI95 211 aa15.82■□□□□ 0.12
LINC00028-201ENST00000435497 KLRF2D3W0D1 207 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 UBA1P22314 1058 aaKnown RBP15.81■□□□□ 0.12
LINC00028-201ENST00000435497 HOXC8P31273 242 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 THPOP40225 353 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 PLEKHG4Q58EX7 1191 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 KCNV1Q6PIU1 500 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 MYOCDQ8IZQ8 938 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 FBXO22Q8NEZ5 403 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 MAP3K20Q9NYL2 800 aaKnown RBP15.81■□□□□ 0.12
LINC00028-201ENST00000435497 PCDHA1Q9Y5I3 950 aa15.81■□□□□ 0.12
LINC00028-201ENST00000435497 EMSYQ7Z589 1322 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 PALM3A6NDB9 673 aaPredicted RBP15.8■□□□□ 0.12
LINC00028-201ENST00000435497 ZBTB5O15062 677 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 TREHO43280 583 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 TGFB3P10600 412 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 IL9P15248 144 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 KCNA5P22460 613 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
LINC00028-201ENST00000435497 CYB5R4Q7L1T6 521 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 KRT23Q9C075 422 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 IL25Q9H293 177 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 RNPEPQ9H4A4 650 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 HCN4Q9Y3Q4 1203 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 PIEZO1Q92508 2521 aa15.8■□□□□ 0.12
LINC00028-201ENST00000435497 C17orf102A2RUQ5 167 aa15.79■□□□□ 0.12
LINC00028-201ENST00000435497 H3BRB1 525 aa15.79■□□□□ 0.12
LINC00028-201ENST00000435497 IGHDP01880 384 aa15.79■□□□□ 0.12
LINC00028-201ENST00000435497 AMHP03971 560 aa15.79■□□□□ 0.12
LINC00028-201ENST00000435497 SMIM10L2AP0DMW4 78 aa15.79■□□□□ 0.12
LINC00028-201ENST00000435497 SMIM10L2BP0DMW5 78 aa15.79■□□□□ 0.12
LINC00028-201ENST00000435497 IMMTQ16891 758 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms