RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 PPP1R2P41236 205 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 HDLBPQ00341 1268 aaKnown RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 RABGAP1Q9Y3P9 1069 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 CACNA1SQ13698 1873 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 ARHGEF35A5YM69 484 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 ENC1O14682 589 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 MYL1P05976 194 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
CLDN4-203ENST00000435050 USP8P40818 1118 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 KIF5AQ12840 1032 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 COASYQ13057 564 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 ADAM9Q13443 819 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 CCDC181Q5TID7 509 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 RAD9BQ6WBX8 426 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 GIMAP8Q8ND71 665 aaPredicted RBP13.48□□□□□ -0.25
CLDN4-203ENST00000435050 WDR24Q96S15 920 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 ZNF577Q9BSK1 485 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 A0A1W2PRG0 241 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 GYPCP04921 128 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 ASNSP08243 561 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 CT47A1Q5JQC4 288 aaPredicted RBP13.48□□□□□ -0.25
CLDN4-203ENST00000435050 SLC35F6Q8N357 371 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 FAM151AQ8WW52 585 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 IDI2Q9BXS1 227 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 EHD4Q9H223 541 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 EPC1Q9H2F5 836 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 SHTN1A0MZ66 631 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 LGALS16A8MUM7 142 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 KCNB1Q14721 858 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 THAP9Q9H5L6 903 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 ABHD10Q9NUJ1 306 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 FZD1Q9UP38 647 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 TFR2Q9UP52 801 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
CLDN4-203ENST00000435050 SPP2Q13103 211 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 GLIS2Q9BZE0 524 aaPredicted RBP13.47□□□□□ -0.25
CLDN4-203ENST00000435050 ABCB11O95342 1321 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 KRT86O43790 486 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 KRT83P78385 493 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 NCBP1Q09161 790 aaKnown RBP13.47□□□□□ -0.25
CLDN4-203ENST00000435050 JAKMIP2Q96AA8 810 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
CLDN4-203ENST00000435050 NAA15Q9BXJ9 866 aaKnown RBP13.47□□□□□ -0.25
CLDN4-203ENST00000435050 EMILIN3Q9NT22 766 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 NR2F2P24468 414 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 TNNT3P45378 269 aaPredicted RBP13.47□□□□□ -0.25
CLDN4-203ENST00000435050 AP3B2Q13367 1082 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 GLIS3Q8NEA6 775 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 PANX2Q96RD6 677 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 HINFPQ9BQA5 517 aa13.47□□□□□ -0.25
CLDN4-203ENST00000435050 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
CLDN4-203ENST00000435050 NOP2P46087 812 aaKnown RBP13.46□□□□□ -0.25
CLDN4-203ENST00000435050 CYP2J2P51589 502 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 PNMA5Q96PV4 448 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 NDST4Q9H3R1 872 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 AGPAT5Q9NUQ2 364 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 LIMA1Q9UHB6 759 aaKnown RBP13.46□□□□□ -0.25
CLDN4-203ENST00000435050 POLR2FP61218 127 aaKnown RBP13.46□□□□□ -0.25
CLDN4-203ENST00000435050 PTPROQ16827 1216 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 CDKAL1Q5VV42 579 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 CCDC70Q6NSX1 233 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 NYAP1Q6ZVC0 841 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 LDHDQ86WU2 507 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 SFR1Q86XK3 245 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 AGBL1Q96MI9 1066 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 C7orf25Q9BPX7 421 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 FKBP3Q00688 224 aaKnown RBP13.46□□□□□ -0.25
CLDN4-203ENST00000435050 ZNF771Q7L3S4 317 aaPredicted RBP13.46□□□□□ -0.25
CLDN4-203ENST00000435050 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.25
CLDN4-203ENST00000435050 DGKZQ13574 1117 aa13.46□□□□□ -0.26
CLDN4-203ENST00000435050 PDIA5Q14554 519 aa13.46□□□□□ -0.26
CLDN4-203ENST00000435050 SPATA20Q8TB22 786 aa13.46□□□□□ -0.26
CLDN4-203ENST00000435050 ADGRG1Q9Y653 693 aa13.46□□□□□ -0.26
CLDN4-203ENST00000435050 TNRC6CQ9HCJ0 1690 aaKnown RBP13.45□□□□□ -0.26
CLDN4-203ENST00000435050 ZBED4O75132 1171 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLDN4-203ENST00000435050 BANK1Q8NDB2 785 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 DYDC2Q96IM9 177 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
CLDN4-203ENST00000435050 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
CLDN4-203ENST00000435050 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 GTPBP4Q9BZE4 634 aaKnown RBP13.45□□□□□ -0.26
CLDN4-203ENST00000435050 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 LUC7LQ9NQ29 371 aaKnown RBP13.45□□□□□ -0.26
CLDN4-203ENST00000435050 BLOC1S4Q9NUP1 217 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 POLR3GO15318 223 aaPredicted RBP13.45□□□□□ -0.26
CLDN4-203ENST00000435050 MED24O75448 989 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 USP11P51784 963 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 JAG1P78504 1218 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 A0A0U1RQJ8 604 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms