RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 MAGOHBQ96A72 148 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 STAMBPL1Q96FJ0 436 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 PYM1Q9BRP8 204 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 NOD2Q9HC29 1040 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 ATP8A2Q9NTI2 1148 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 PHLPP1O60346 1717 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 ZNF233A6NK53 670 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 SERPINB2P05120 415 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 EEF1GP26641 437 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 SCTRP47872 440 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 NAPAP54920 295 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 RNF217Q8TC41 542 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 ZNF512BQ96KM6 892 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 SPAG5Q96R06 1193 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 L3MBTL1Q9Y468 752 aa8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 CTDP1Q9Y5B0 961 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-203ENST00000434046 MYBL1P10243 752 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 PRDX5P30044 214 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 MECOMQ03112 1051 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 ALX1Q15699 326 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 DDX42Q86XP3 938 aaKnown RBP eCLIP8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 KCNV2Q8TDN2 545 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 IGDCC4Q8TDY8 1250 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 ZHX3Q9H4I2 956 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 A1CFQ9NQ94 594 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 XDHP47989 1333 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 LMO7Q8WWI1 1683 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 BICDL2A1A5D9 508 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 DIAPH2O60879 1101 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 PCK1P35558 622 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 CCNHP51946 323 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 GTF2IP78347 998 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 GFPT1Q06210 699 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 RAPGEF1Q13905 1077 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 NTRK3Q16288 839 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 DTHD1Q6ZMT9 781 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 MGARPQ8TDB4 240 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 AP1M1Q9BXS5 423 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 SWAP70Q9UH65 585 aa8.13□□□□□ -1.11
SYNPO2-203ENST00000434046 ATP2B4P23634 1241 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 SSR1P43307 286 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 DRP2Q13474 957 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 SF3B3Q15393 1217 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ACCSLQ4AC99 568 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 WDR59Q6PJI9 974 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 WHAMMQ8TF30 809 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 FAM84BQ96KN1 310 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ELAC2Q9BQ52 826 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 AFF2P51816 1311 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 TUBGCP6Q96RT7 1819 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ABCC6O95255 1503 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 GOLGA6L10A0A0M3HER8 536 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 KRT18P05783 430 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 PLCB4Q15147 1175 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 RPS6KA1Q15418 735 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ANKRD20A8PQ5CZ79 823 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ELOA2Q8IYF1 753 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 MDM1Q8TC05 714 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 GPR101Q96P66 508 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 DNAJC7Q99615 494 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 WDR19Q8NEZ3 1342 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 TNS2Q63HR2 1409 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 PP2D1A8MPX8 630 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 C21orf2O43822 256 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 PALMO75781 387 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 APBA3O96018 575 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 PCP11498 1178 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 LACTBP83111 547 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 GRAPQ13588 217 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 DIXDC1Q155Q3 683 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 NBPF9Q3BBW0 867 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 GLE1Q53GS7 698 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 DPP8Q6V1X1 898 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ADAT2Q7Z6V5 191 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 GRAPLQ8TC17 118 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 CASKIN2Q8WXE0 1202 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 CUL5Q93034 780 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 GJD4Q96KN9 370 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 EYA3Q99504 573 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 SH3GL3Q99963 347 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 SH2D4AQ9H788 454 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ATP6V0A4Q9HBG4 840 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 IRAK4Q9NWZ3 460 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 ATP8A1Q9Y2Q0 1164 aa8.12□□□□□ -1.11
SYNPO2-203ENST00000434046 DNM1LO00429 736 aa8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 SMIM24O75264 130 aa8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 CLSTN1O94985 981 aa8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 EPB41P11171 864 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 PMS1P54277 932 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 KCNB1Q14721 858 aa8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 TRADDQ15628 312 aa8.11□□□□□ -1.11
SYNPO2-203ENST00000434046 QPCTQ16769 361 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms