RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 SOD2P04179 222 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 ASGR2P07307 311 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 CACNB2Q08289 660 aaPredicted RBP5.11□□□□□ -1.59
LINC01239-201ENST00000433645 SPIRE1Q08AE8 756 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 FNDC3BQ53EP0 1204 aaKnown RBP5.11□□□□□ -1.59
LINC01239-201ENST00000433645 OTOP3Q7RTS5 596 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 NOP9Q86U38 636 aaKnown RBP5.11□□□□□ -1.59
LINC01239-201ENST00000433645 SIAH1Q8IUQ4 282 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 TTLL11Q8NHH1 800 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 ZSCAN18Q8TBC5 510 aaPredicted RBP5.11□□□□□ -1.59
LINC01239-201ENST00000433645 PANK1Q8TE04 598 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 PALD1Q9ULE6 856 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 KCTD3Q9Y597 815 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 HCFC2Q9Y5Z7 792 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 BLACEA4D250 179 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 NPIPB6E9PJ23 425 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 NPTXRO95502 500 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 PMLP29590 882 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 RANGAP1P46060 587 aaPredicted RBP5.1□□□□□ -1.59
LINC01239-201ENST00000433645 CIAPIN1Q6FI81 312 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 ETV3LQ6ZN32 361 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 MILR1Q7Z6M3 343 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 FAM129CQ86XR2 697 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 FAM126BQ8IXS8 530 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 TMEFF1Q8IYR6 380 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 UHMK1Q8TAS1 419 aaKnown RBP5.1□□□□□ -1.59
LINC01239-201ENST00000433645 PIF1Q9H611 641 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 NCOA5Q9HCD5 579 aaKnown RBP5.1□□□□□ -1.59
LINC01239-201ENST00000433645 PCDHB4Q9Y5E5 795 aa5.1□□□□□ -1.59
LINC01239-201ENST00000433645 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.09□□□□□ -1.59
LINC01239-201ENST00000433645 RFPL3O75679 317 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 ATF2P15336 505 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 CFPP27918 469 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 EPHA5P54756 1037 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 JAG1P78504 1218 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 HTRA3P83110 453 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 FOXO4P98177 505 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 GUCY1A3Q02108 690 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 SQSTM1Q13501 440 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 CNKSR3Q6P9H4 555 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 MTDHQ86UE4 582 aaKnown RBP5.09□□□□□ -1.59
LINC01239-201ENST00000433645 ZC3H18Q86VM9 953 aaKnown RBP5.09□□□□□ -1.59
LINC01239-201ENST00000433645 C1QL4Q86Z23 238 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 PCDH19Q8TAB3 1148 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 SH3TC2Q8TF17 1288 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 DACT3Q96B18 629 aaPredicted RBP5.09□□□□□ -1.59
LINC01239-201ENST00000433645 MAGEB10Q96LZ2 347 aaPredicted RBP5.09□□□□□ -1.59
LINC01239-201ENST00000433645 RXFP1Q9HBX9 757 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 MYOTQ9UBF9 498 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 ASH2LQ9UBL3 628 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 SFMBT1Q9UHJ3 866 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 FAN1Q9Y2M0 1017 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 SIT1Q9Y3P8 196 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 TRAF6Q9Y4K3 522 aa5.09□□□□□ -1.59
LINC01239-201ENST00000433645 TCRBV5S2A0A599 114 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 NUAK1O60285 661 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 GNAT1P11488 350 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 SSPNQ14714 243 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 FAM47CQ5HY64 1035 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 C16orf59Q7L2K0 433 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 LRRC56Q8IYG6 542 aaPredicted RBP5.08□□□□□ -1.6
LINC01239-201ENST00000433645 LINC00482Q8N8I6 264 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 FBXW5Q969U6 566 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 RNPC3Q96LT9 517 aaKnown RBP5.08□□□□□ -1.6
LINC01239-201ENST00000433645 JAM3Q9BX67 310 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 IPPKQ9H8X2 491 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 SLC52A2Q9HAB3 445 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 EPB41L4AQ9HCS5 686 aaPredicted RBP5.08□□□□□ -1.6
LINC01239-201ENST00000433645 DTLQ9NZJ0 730 aa5.08□□□□□ -1.6
LINC01239-201ENST00000433645 PPARGC1AQ9UBK2 798 aaKnown RBP5.08□□□□□ -1.6
LINC01239-201ENST00000433645 B4E1Z4 1266 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 CRTAMO95727 393 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 CYP2C8P10632 490 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 PI3P19957 117 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 NCKAP1LP55160 1127 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 LACTBP83111 547 aaPredicted RBP5.07□□□□□ -1.6
LINC01239-201ENST00000433645 TCEA2Q15560 299 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 GPR19Q15760 415 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 TCERG1LQ5VWI1 586 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 HOMER1Q86YM7 354 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 NLGN4XQ8N0W4 816 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 SLC7A14Q8TBB6 771 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 PIP4K2CQ8TBX8 421 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 TOE1Q96GM8 510 aaKnown RBP5.07□□□□□ -1.6
LINC01239-201ENST00000433645 TRIM39Q9HCM9 518 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 USP35Q9P2H5 1018 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 NDOR1Q9UHB4 597 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 PLA2G2DQ9UNK4 145 aa5.07□□□□□ -1.6
LINC01239-201ENST00000433645 SH3D21A4FU49 640 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 NKX3-2P78367 333 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 SAPCD2Q86UD0 394 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 SMARCC2Q8TAQ2 1214 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 FNIP1Q8TF40 1166 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 PWWP2AQ96N64 755 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 CELF4Q9BZC1 486 aaKnown RBP5.06□□□□□ -1.6
LINC01239-201ENST00000433645 INTS7Q9NVH2 962 aaKnown RBP5.06□□□□□ -1.6
LINC01239-201ENST00000433645 DSEQ9UL01 958 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 PCDHA8Q9Y5H6 950 aa5.06□□□□□ -1.6
LINC01239-201ENST00000433645 TCRBV16S1A1N1A0A5B0 115 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms