RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 NLGN2Q8NFZ4 835 aa7.98□□□□□ -1.13
USP54-206ENST00000433394 HHIPL1Q96JK4 782 aa7.98□□□□□ -1.13
USP54-206ENST00000433394 SMAD5Q99717 465 aaKnown RBP7.98□□□□□ -1.13
USP54-206ENST00000433394 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
USP54-206ENST00000433394 JAM3Q9BX67 310 aa7.98□□□□□ -1.13
USP54-206ENST00000433394 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.97□□□□□ -1.13
USP54-206ENST00000433394 FITM1A5D6W6 292 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 TRAF5O00463 557 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 KRT37O76014 449 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 ARL4AP40617 200 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 ADCYAP1R1P41586 468 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 SESN3P58005 492 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 LACTBP83111 547 aaPredicted RBP7.97□□□□□ -1.13
USP54-206ENST00000433394 SKOR2Q2VWA4 1001 aaPredicted RBP7.97□□□□□ -1.13
USP54-206ENST00000433394 VSIG10LQ86VR7 867 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 FMNL3Q8IVF7 1028 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 EFHBQ8N7U6 833 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 CNTD1Q8N815 330 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 TMEM52Q8NDY8 209 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 PPARGC1AQ9UBK2 798 aaKnown RBP7.97□□□□□ -1.13
USP54-206ENST00000433394 ZNF281Q9Y2X9 895 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 RWDD3Q9Y3V2 267 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 WASHC2AQ641Q2 1341 aa7.97□□□□□ -1.13
USP54-206ENST00000433394 E2F8A0AVK6 867 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 USP2O75604 605 aaPredicted RBP7.96□□□□□ -1.14
USP54-206ENST00000433394 ITGB2P05107 769 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 RAC2P15153 192 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 FPR2P25090 351 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.14
USP54-206ENST00000433394 MTMR1Q13613 665 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 DDB1Q16531 1140 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 MSMPQ1L6U9 139 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 ARHGAP36Q6ZRI8 547 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 SLCO6A1Q86UG4 719 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 ZBTB46Q86UZ6 589 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 RIOX2Q8IUF8 465 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 PDZD8Q8NEN9 1154 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 NUP43Q8NFH3 380 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 BCL7CQ8WUZ0 217 aaPredicted RBP7.96□□□□□ -1.14
USP54-206ENST00000433394 CHTF18Q8WVB6 975 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 LINC01599Q8WXQ3 324 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 JMJD8Q96S16 334 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 MENTQ9BUN1 341 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 EMC7Q9NPA0 242 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 PDLIM7Q9NR12 457 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 CBLCQ9ULV8 474 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 ZNF652Q9Y2D9 606 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 EID1Q9Y6B2 187 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 X6R8D5 127 aa7.96□□□□□ -1.14
USP54-206ENST00000433394 ATP2A2P16615 1042 aaKnown RBP7.95□□□□□ -1.14
USP54-206ENST00000433394 CCND1P24385 295 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 MECP2P51608 486 aaKnown RBP7.95□□□□□ -1.14
USP54-206ENST00000433394 NEK2P51955 445 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 IRF9Q00978 393 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 BNIP3Q12983 259 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 SYDE2Q5VT97 1194 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 OTOP3Q7RTS5 596 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 OSTM1Q86WC4 334 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 Q8N1Y9 231 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 FLCNQ8NFG4 579 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 DPF3Q92784 378 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 AP5M1Q9H0R1 490 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 ADAMTS10Q9H324 1103 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 AASDHPPTQ9NRN7 309 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 IMPACTQ9P2X3 320 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 NUDT5Q9UKK9 219 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 DSEQ9UL01 958 aa7.95□□□□□ -1.14
USP54-206ENST00000433394 ZGLP1P0C6A0 271 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 ID4P47928 161 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 HK2P52789 917 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 PPP2R5AQ15172 486 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 HSF5Q4G112 596 aaPredicted RBP7.94□□□□□ -1.14
USP54-206ENST00000433394 PRSS36Q5K4E3 855 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 OTOP1Q7RTM1 612 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 NLRP10Q86W26 655 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 DCP2Q8IU60 420 aaKnown RBP7.94□□□□□ -1.14
USP54-206ENST00000433394 CHMP4CQ96CF2 233 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 ASIC4Q96FT7 647 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 AHCYL2Q96HN2 611 aaKnown RBP7.94□□□□□ -1.14
USP54-206ENST00000433394 ASPSCR1Q9BZE9 553 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 SLC6A20Q9NP91 592 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 OXSMQ9NWU1 459 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 FBXL7Q9UJT9 491 aa7.94□□□□□ -1.14
USP54-206ENST00000433394 ZNF561-AS1K7EIQ3 104 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 PROCP04070 461 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 CD8BP10966 210 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 COL6A2P12110 1019 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 PRKCAP17252 672 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 LSP1P33241 339 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 FIGNQ5HY92 759 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 STEAP3Q658P3 488 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 BICRALQ6AI39 1079 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 CYP4F22Q6NT55 531 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 SLC23A3Q6PIS1 610 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 HHIPL2Q6UWX4 724 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 LHFPL2Q6ZUX7 228 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 TRIM48Q8IWZ4 208 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 ZZZ3Q8IYH5 903 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 COG1Q8WTW3 980 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 SLC5A5Q92911 643 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms