RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 LCMT1Q9UIC8 334 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 ERVK-7P63135 1459 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 FGAP02671 866 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 HOXB7P09629 217 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 KRT10P13645 584 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 ZAP70P43403 619 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 LMNB2Q03252 620 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 LRRC14Q15048 493 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 SGO2Q562F6 1265 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 DNAJC9Q8WXX5 260 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 NRBF2Q96F24 287 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 LZTS1Q9Y250 596 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 SNX24Q9Y343 169 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 FLT4P35916 1363 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 PALMO75781 387 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 HAUS5O94927 633 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 RPS6KA2Q15349 733 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 TAB3Q8N5C8 712 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 BABAM1Q9NWV8 329 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 ZBBXA8MT70 800 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 TEX33O43247 280 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 TTC4O95801 387 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 FGGP02679 453 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 LMNB1P20700 586 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 SERPINB3P29508 390 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 TECP42680 631 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 YWHAGP61981 247 aaKnown RBP eCLIP11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 MYCT1Q8N699 235 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 SDCCAG3Q96C92 435 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 PAPOLBQ9NRJ5 636 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 NUB1Q9Y5A7 615 aa11.29□□□□□ -0.6
PKNOX1-203ENST00000432907 UNC13BO14795 1591 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 SERPING1P05155 500 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 LLGL1Q15334 1064 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 SNRNP27Q8WVK2 155 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 DPF2Q92785 391 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 FAM161BQ96MY7 647 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 TRIM56Q9BRZ2 755 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 METTL22Q9BUU2 404 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 KDM1AO60341 852 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 KRT14P02533 472 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 PAPOLAP51003 745 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 OCA2Q04671 838 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 ZNF594Q96JF6 807 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 NT5C3AQ9H0P0 336 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 ZBTB21Q9ULJ3 1066 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 H3BQF6 201 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 EXOC5O00471 708 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 GIPC1O14908 333 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 MT-ND3P03897 115 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 GNAT1P11488 350 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 HMGB2P26583 209 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 BFSP1Q12934 665 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 ZNF354CQ86Y25 554 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 BLIDQ8IZY5 108 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 DNAJC17Q9NVM6 304 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 PPARGC1AQ9UBK2 798 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 ADAMTS1Q9UHI8 967 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 ZNF532Q9HCE3 1301 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 KIF1BO60333 1816 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 NVLO15381 856 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 CNGA1P29973 690 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 BSPRYQ5W0U4 402 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 SRRM1Q8IYB3 904 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 ZNF513Q8N8E2 541 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 HAUS7Q99871 368 aa11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 EIF2AQ9BY44 585 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-203ENST00000432907 MCF2LO15068 1137 aa11.27□□□□□ -0.6
PKNOX1-203ENST00000432907 RGS9BPQ6ZS82 235 aa11.27□□□□□ -0.6
PKNOX1-203ENST00000432907 RUBCNQ92622 972 aa11.27□□□□□ -0.6
PKNOX1-203ENST00000432907 CUEDC2Q9H467 287 aa11.27□□□□□ -0.6
PKNOX1-203ENST00000432907 TRAF3IP3Q9Y228 551 aa11.27□□□□□ -0.6
PKNOX1-203ENST00000432907 RASA4BC9J798 803 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 RASA4O43374 803 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 STK10O94804 968 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 MCF2P10911 925 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 PMS2P54278 862 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 PTGISQ16647 500 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 ANO5Q75V66 913 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 NOA1Q8NC60 698 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 METTL14Q9HCE5 456 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 CHMP2AO43633 222 aa11.27□□□□□ -0.61
PKNOX1-203ENST00000432907 NCK2O43639 380 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms