RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 MTG1Q9BT17 334 aaPredicted RBP10.98□□□□□ -0.65
CDC42-IT1-201ENST00000431803 ZNF576Q9H609 170 aa10.98□□□□□ -0.65
CDC42-IT1-201ENST00000431803 JMJD4Q9H9V9 463 aa10.98□□□□□ -0.65
CDC42-IT1-201ENST00000431803 TRMT13Q9NUP7 481 aaKnown RBP10.98□□□□□ -0.65
CDC42-IT1-201ENST00000431803 CXXC1Q9P0U4 656 aaPredicted RBP10.98□□□□□ -0.65
CDC42-IT1-201ENST00000431803 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
CDC42-IT1-201ENST00000431803 TTC28Q96AY4 2481 aa10.98□□□□□ -0.65
CDC42-IT1-201ENST00000431803 XIRP2A4UGR9 3374 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 OPLAHO14841 1288 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 KPNA6O60684 536 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 MYL3P08590 195 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 SUPT20HL2P0C7V6 817 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 TXNP10599 105 aaKnown RBP10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 CCL23P55773 120 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 TTLL4Q14679 1199 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 BRDTQ58F21 947 aaPredicted RBP10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 IFIT1BQ5T764 474 aaKnown RBP10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 NFRKBQ6P4R8 1299 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 CYB5R4Q7L1T6 521 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 MCF2L2Q86YR7 1114 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 STAG2Q8N3U4 1231 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 NSUN6Q8TEA1 469 aaKnown RBP10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 COPS5Q92905 334 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 MTMR8Q96EF0 704 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 TAAR1Q96RJ0 339 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 IWS1Q96ST2 819 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
CDC42-IT1-201ENST00000431803 MYH6P13533 1939 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 PPP1R11O60927 126 aaPredicted RBP10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 FGBP02675 491 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 CYP21A2P08686 494 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 CYP2C9P11712 490 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 CHMLP26374 656 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 HSD17B4P51659 736 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 PTPN11Q06124 597 aaPredicted RBP10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 ARHGAP1Q07960 439 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 SLC35G1Q2M3R5 365 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 NBPF20Q3BBV1 942 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 OTOP2Q7RTS6 562 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 AMNQ9BXJ7 453 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 COL25A1Q9BXS0 654 aaPredicted RBP10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 MTIF3Q9H2K0 278 aaKnown RBP10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 MAD2L2Q9UI95 211 aa10.96□□□□□ -0.65
CDC42-IT1-201ENST00000431803 KIAA1217Q5T5P2 1943 aa10.96□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TANC1Q9C0D5 1861 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PALM3A6NDB9 673 aaPredicted RBP10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 KLRF2D3W0D1 207 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ZBTB5O15062 677 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 DHX16O60231 1041 aaKnown RBP10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PFKMP08237 780 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MMP3P08254 477 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PTH1RQ03431 593 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PTGDRQ13258 359 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RAB30Q15771 203 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 STXBP2Q15833 593 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RPUSD2Q8IZ73 545 aaKnown RBP10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TTC13Q8NBP0 860 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 AFG1LQ8WV93 481 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RUFY2Q8WXA3 655 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 EMID1Q96A84 441 aaPredicted RBP10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SCLYQ96I15 445 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 VAT1LQ9HCJ6 419 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PXMP2Q9NR77 195 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TAF6LQ9Y6J9 622 aa10.95□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GBF1Q92538 1859 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SGSM2O43147 1006 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 EIF3JO75822 258 aaKnown RBP10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CFBP00751 764 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GH1P01241 217 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 EIF2AK2P19525 551 aaKnown RBP10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RFC2P35250 354 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TRDNQ13061 729 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GRM4Q14833 912 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 LY6KQ17RY6 165 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 FAM47CQ5HY64 1035 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SEPT14Q6ZU15 432 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 STOX1Q6ZVD7 989 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SESTD1Q86VW0 696 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 USP38Q8NB14 1042 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PPP1R13LQ8WUF5 828 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 KAT2BQ92831 832 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CTAGE1Q96RT6 745 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RIOX1Q9H6W3 641 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MAP3K20Q9NYL2 800 aaKnown RBP10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MSRAQ9UJ68 235 aa10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 YBX2Q9Y2T7 364 aaKnown RBP10.94□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SCN5AQ14524 2016 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 E7EWF7 191 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CYTH3O43739 400 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RGS20O76081 388 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 NR3C2P08235 984 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TROAPQ12815 778 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SAMD3Q8N6K7 520 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms