RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 PIBF1Q8WXW3 757 aa18.71■□□□□ 0.59
AC055876.3-201ENST00000431496 PPM1EQ8WY54 764 aa18.71■□□□□ 0.59
AC055876.3-201ENST00000431496 DHX38Q92620 1227 aaKnown RBP18.71■□□□□ 0.59
AC055876.3-201ENST00000431496 ZFP91Q96JP5 570 aaPredicted RBP18.71■□□□□ 0.59
AC055876.3-201ENST00000431496 SPATA33Q96N06 139 aa18.71■□□□□ 0.59
AC055876.3-201ENST00000431496 SLC9A7Q96T83 725 aa18.71■□□□□ 0.59
AC055876.3-201ENST00000431496 GBF1Q92538 1859 aa18.71■□□□□ 0.59
AC055876.3-201ENST00000431496 IGFBP4P22692 258 aa18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 RBL2Q08999 1139 aa18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 ZNF654Q8IZM8 581 aa18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 TMTC2Q8N394 836 aa18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 CTCFLQ8NI51 663 aaPredicted RBP18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 SPZ1Q9BXG8 430 aa18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
AC055876.3-201ENST00000431496 PRC1O43663 620 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 SORBS3O60504 671 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 DDAH1O94760 285 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 BAIAP3O94812 1187 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 PARNO95453 639 aaKnown RBP18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 CKBP12277 381 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 UBA1P22314 1058 aaKnown RBP18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 KIF5BP33176 963 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 MCM5P33992 734 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 MRPS9P82933 396 aaKnown RBP18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 PTK7Q13308 1070 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 CASC1Q6TDU7 716 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 LRRC8DQ7L1W4 858 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 RRP36Q96EU6 259 aaKnown RBP18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 LZTS2Q9BRK4 669 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 MYL10Q9BUA6 226 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 PRDM6Q9NQX0 595 aa18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 SPTBN5Q9NRC6 3674 aaKnown RBP18.69■□□□□ 0.58
AC055876.3-201ENST00000431496 STAM2O75886 525 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 CA3P07451 260 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 CCDC85BQ15834 202 aaPredicted RBP18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 GNPTABQ3T906 1256 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 HERC6Q8IVU3 1022 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 SYMPKQ92797 1274 aaKnown RBP18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 ESYT1Q9BSJ8 1104 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 C16orf70Q9BSU1 422 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 BCAS3Q9H6U6 928 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 FRMPD4Q14CM0 1322 aa18.68■□□□□ 0.58
AC055876.3-201ENST00000431496 TRANK1O15050 2925 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 SPATA31C2B4DYI2 1134 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 KIF28PB7ZC32 967 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 SLC27A2O14975 620 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 NBNO60934 754 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 CXCL10P02778 98 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 ICAM3P32942 547 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 GNAQP50148 359 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 ZNF200P98182 395 aaPredicted RBP18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 TRIM71Q2Q1W2 868 aaKnown RBP18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 TMEM87BQ96K49 555 aa18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 PRRC2BQ5JSZ5 2229 aaKnown RBP18.67■□□□□ 0.58
AC055876.3-201ENST00000431496 SH2B2O14492 632 aaPredicted RBP18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 LIFRP42702 1097 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 COL9A3Q14050 684 aaPredicted RBP18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 HIC1Q14526 733 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 NECTIN1Q15223 517 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 TJAP1Q5JTD0 557 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 TRAF7Q6Q0C0 670 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 USP17L6PQ6QN14 398 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 NFXL1Q6ZNB6 911 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 WNT8BQ93098 351 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 RTEL1Q9NZ71 1219 aa18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 SEC63Q9UGP8 760 aaKnown RBP18.66■□□□□ 0.58
AC055876.3-201ENST00000431496 TANC1Q9C0D5 1861 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 CCDC69A6NI79 296 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 H3BRB1 525 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 PIK3CDO00329 1044 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 MEIS2O14770 477 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 PLEKHA8P1O95397 391 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 KCNJ6P48051 423 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 WDR5P61964 334 aaKnown RBP18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 TAP1Q03518 808 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 SEMA3FQ13275 785 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 NEDD9Q14511 834 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 ZNF618Q5T7W0 954 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 CREB3L3Q68CJ9 461 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 XRRA1Q6P2D8 792 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 CNKSR3Q6P9H4 555 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 SMARCC2Q8TAQ2 1214 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 ATXN2LQ8WWM7 1075 aaKnown RBP18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 CUL5Q93034 780 aa18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 TUT1Q9H6E5 874 aaKnown RBP18.65■□□□□ 0.58
AC055876.3-201ENST00000431496 RFXAPO00287 272 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 FIBPO43427 364 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 LGALS2P05162 132 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 CALM1P0DP23 149 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 CALM2P0DP24 149 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 CALM3P0DP25 149 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 POU3F3P20264 500 aaPredicted RBP18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 PCNX4Q63HM2 1172 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 METTL7BQ6UX53 244 aa18.64■□□□□ 0.57
AC055876.3-201ENST00000431496 CYFIP1Q7L576 1253 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms