RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 ABCC10Q5T3U5 1492 aa12.7□□□□□ -0.38
RIMKLA-202ENST00000431473 ARID5BQ14865 1188 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 KRT80Q6KB66 452 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 PDZD4Q76G19 769 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 EIF3CLB5ME19 914 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 IKBKBO14920 756 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 BEND6Q5SZJ8 279 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 GALNT17Q6IS24 598 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 HIPK4Q8NE63 616 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 EIF3CQ99613 913 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 ANGPTL2Q9UKU9 493 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 PLAAQ9Y263 795 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 KDM5DQ9BY66 1539 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 GSTA4O15217 222 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 CFLARO15519 480 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 SKIP12755 728 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 EEF1DP29692 281 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 RNASELQ05823 741 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 ZBTB8OSQ8IWT0 167 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 DYDC2Q96IM9 177 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 TSC22D3Q99576 134 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 UBE2TQ9NPD8 197 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 SCHIP1Q9P0W5 487 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 KCNQ3O43525 872 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 CDC25AP30304 524 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 MYLK4Q86YV6 388 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 POLR2BP30876 1174 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 NR5A1Q13285 461 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 VSTM4Q8IW00 320 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 TADA3O75528 432 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 PSMC2P35998 433 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 IGBP1P78318 339 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 TRAIPQ9BWF2 469 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 H0Y3Z8 333 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 GSPT2Q8IYD1 628 aaKnown RBP12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 DNAAF3Q8N9W5 541 aa12.69□□□□□ -0.38
RIMKLA-202ENST00000431473 MEIS1O00470 390 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 S100BP04271 92 aaPredicted RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 PCIF1Q9H4Z3 704 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 RASGRF2O14827 1237 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 UBXN2AP68543 259 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 DARS2Q6PI48 645 aaKnown RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 SPICE1Q8N0Z3 855 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 PBKQ96KB5 322 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 MAGEF1Q9HAY2 307 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 GGCXP38435 758 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 FBXO11Q86XK2 927 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 PLA2G4DQ86XP0 818 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 SMYD3Q9H7B4 428 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 HESX1Q9UBX0 185 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 G3BP2Q9UN86 482 aaKnown RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 PCDHA1Q9Y5I3 950 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 SLC4A7Q9Y6M7 1214 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 RAB44Q7Z6P3 723 aaPredicted RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 NOP9Q86U38 636 aaKnown RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 CEP70Q8NHQ1 597 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 MAPK13O15264 365 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 KRT1P04264 644 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 POLD1P28340 1107 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 GNPTABQ3T906 1256 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 CCNYQ8ND76 341 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 RMDN2Q96LZ7 410 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 FGD4Q96M96 766 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 MMEP08473 750 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 GRAMD1BQ3KR37 738 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 CALN1Q9BXU9 219 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 EIF4E1BA6NMX2 242 aaKnown RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 HMGB1P1B2RPK0 211 aaPredicted RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 H0YIN7 160 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 NVLO15381 856 aaKnown RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 STX1BP61266 288 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 ACTR5Q9H9F9 607 aaPredicted RBP12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
RIMKLA-202ENST00000431473 NPC1L1Q9UHC9 1359 aa12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 TERF2Q15554 542 aa12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 PFDN6O15212 129 aa12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 SERPING1P05155 500 aa12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 KITP10721 976 aa12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 DDIT3P35638 169 aa12.67□□□□□ -0.38
RIMKLA-202ENST00000431473 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms