RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 GGPS1O95749 300 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 SCG2P13521 617 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
HDAC6-207ENST00000430858 ADCY7P51828 1080 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 AKAP17AQ02040 695 aaKnown RBP11.26□□□□□ -0.61
HDAC6-207ENST00000430858 SP2Q02086 613 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 FPGSQ05932 587 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-207ENST00000430858 NEDD9Q14511 834 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 ZNF274Q96GC6 653 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-207ENST00000430858 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-207ENST00000430858 SPATA33Q96N06 139 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 KATNAL1Q9BW62 490 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 RNF26Q9BY78 433 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-207ENST00000430858 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 RTEL1Q9NZ71 1219 aa11.26□□□□□ -0.61
HDAC6-207ENST00000430858 ESYT2A0FGR8 921 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-207ENST00000430858 HOXD8P13378 290 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-207ENST00000430858 IFNAR1P17181 557 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
HDAC6-207ENST00000430858 AP3B2Q13367 1082 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 NTRK3Q16288 839 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 HSDL1Q3SXM5 330 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 FAM47CQ5HY64 1035 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 MFSD5Q6N075 450 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 METTL7BQ6UX53 244 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 TMEM199Q8N511 208 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-207ENST00000430858 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 CDHR1Q96JP9 859 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 SENP7Q9BQF6 1050 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 TRPV6Q9H1D0 765 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
HDAC6-207ENST00000430858 LTBP2Q14767 1821 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 CPLX1O14810 134 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 MAFGO15525 162 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 F2P00734 622 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
HDAC6-207ENST00000430858 SEMA3FQ13275 785 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.61
HDAC6-207ENST00000430858 SHHQ15465 462 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 PKN1Q16512 942 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 CPLX2Q6PUV4 134 aaKnown RBP11.24□□□□□ -0.61
HDAC6-207ENST00000430858 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 TRIM22Q8IYM9 498 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 GIMAP8Q8ND71 665 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-207ENST00000430858 KAT2BQ92831 832 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 PHKBQ93100 1093 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 IL17RAQ96F46 866 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 SLC26A6Q9BXS9 759 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 ZMYND12Q9H0C1 365 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 TRMT13Q9NUP7 481 aaKnown RBP11.24□□□□□ -0.61
HDAC6-207ENST00000430858 UBIAD1Q9Y5Z9 338 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 TRIOBPQ9H2D6 2365 aa11.24□□□□□ -0.61
HDAC6-207ENST00000430858 KIAA1217Q5T5P2 1943 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 HAS3O00219 553 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 NOP56O00567 594 aaKnown RBP11.23□□□□□ -0.61
HDAC6-207ENST00000430858 SOX1O00570 391 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-207ENST00000430858 SORBS3O60504 671 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 ITGB5P18084 799 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 GNA11P29992 359 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 PSEN2P49810 448 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 CHMP4BP1P59074 171 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 MTMR1Q13613 665 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 ANKRD1Q15327 319 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 C9orf50Q5SZB4 431 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 CYFIP1Q7L576 1253 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 CCDC148Q8NFR7 591 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 NOC4LQ9BVI4 516 aaKnown RBP11.23□□□□□ -0.61
HDAC6-207ENST00000430858 ANO3Q9BYT9 981 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 NCOA5Q9HCD5 579 aaKnown RBP11.23□□□□□ -0.61
HDAC6-207ENST00000430858 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 NOD1Q9Y239 953 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 RANBP2P49792 3224 aaKnown RBP11.23□□□□□ -0.61
HDAC6-207ENST00000430858 SCN10AQ9Y5Y9 1956 aa11.23□□□□□ -0.61
HDAC6-207ENST00000430858 ZNF286BP0CG31 522 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 CYP2C9P11712 490 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 CSF2RAP15509 400 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 CYP2C18P33260 490 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 SREBF1P36956 1147 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 EPHB4P54760 987 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 SSRP1Q08945 709 aaKnown RBP11.22□□□□□ -0.61
HDAC6-207ENST00000430858 MFSD10Q14728 455 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 KIAA0753Q2KHM9 967 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 C7orf31Q8N865 590 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 BICD2Q8TD16 824 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 LRCH3Q96II8 777 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 PGBD1Q96JS3 809 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 GPR20Q99678 358 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 MXRA8Q9BRK3 442 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms